Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
UPK1AO00322 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.95■□□□□ 0.94
UPK1AO00322 MIR6724-1-201ENST00000616420 92 ntBASIC20.95■□□□□ 0.94
UPK1AO00322 MIR6724-2-201ENST00000616483 92 ntBASIC20.95■□□□□ 0.94
UPK1AO00322 MIR6724-4-201ENST00000617390 92 ntBASIC20.95■□□□□ 0.94
UPK1AO00322 MIR6724-3-201ENST00000622482 92 ntBASIC20.95■□□□□ 0.94
UPK1AO00322 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
UPK1AO00322 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
UPK1AO00322 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
UPK1AO00322 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
UPK1AO00322 AL353803.4-201ENST00000565882 1934 ntBASIC20.94■□□□□ 0.94
UPK1AO00322 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.94■□□□□ 0.94
UPK1AO00322 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
UPK1AO00322 AC144652.1-201ENST00000609974 1624 ntBASIC20.94■□□□□ 0.94
UPK1AO00322 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.94■□□□□ 0.94
UPK1AO00322 KRT16P3-201ENST00000439127 1283 ntBASIC20.94■□□□□ 0.94
UPK1AO00322 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
UPK1AO00322 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
UPK1AO00322 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
UPK1AO00322 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
UPK1AO00322 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
UPK1AO00322 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
UPK1AO00322 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
UPK1AO00322 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
UPK1AO00322 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
UPK1AO00322 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.93■□□□□ 0.94
UPK1AO00322 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
UPK1AO00322 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.93■□□□□ 0.94
UPK1AO00322 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.93■□□□□ 0.94
UPK1AO00322 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.93■□□□□ 0.94
UPK1AO00322 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.93■□□□□ 0.94
UPK1AO00322 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.93■□□□□ 0.94
UPK1AO00322 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
UPK1AO00322 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
UPK1AO00322 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.93■□□□□ 0.94
UPK1AO00322 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.93■□□□□ 0.94
UPK1AO00322 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.93■□□□□ 0.94
UPK1AO00322 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
UPK1AO00322 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
UPK1AO00322 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.92■□□□□ 0.94
UPK1AO00322 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
UPK1AO00322 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
UPK1AO00322 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.92■□□□□ 0.94
UPK1AO00322 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.92■□□□□ 0.94
UPK1AO00322 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.92■□□□□ 0.94
UPK1AO00322 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
UPK1AO00322 AC009102.2-201ENST00000606772 1639 ntBASIC20.92■□□□□ 0.94
UPK1AO00322 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
UPK1AO00322 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
UPK1AO00322 AC139530.1-201ENST00000575312 1977 ntBASIC20.92■□□□□ 0.94
UPK1AO00322 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
UPK1AO00322 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
UPK1AO00322 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
UPK1AO00322 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
UPK1AO00322 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
UPK1AO00322 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.91■□□□□ 0.94
UPK1AO00322 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
UPK1AO00322 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
UPK1AO00322 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
UPK1AO00322 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
UPK1AO00322 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
UPK1AO00322 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
UPK1AO00322 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
UPK1AO00322 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
UPK1AO00322 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
UPK1AO00322 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
UPK1AO00322 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
UPK1AO00322 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
UPK1AO00322 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
UPK1AO00322 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
UPK1AO00322 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
UPK1AO00322 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
UPK1AO00322 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
UPK1AO00322 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
UPK1AO00322 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
UPK1AO00322 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.89■□□□□ 0.94
UPK1AO00322 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
UPK1AO00322 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
UPK1AO00322 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
UPK1AO00322 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
UPK1AO00322 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
UPK1AO00322 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
UPK1AO00322 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
UPK1AO00322 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
UPK1AO00322 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
UPK1AO00322 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
UPK1AO00322 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
UPK1AO00322 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.88■□□□□ 0.93
UPK1AO00322 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
UPK1AO00322 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.88■□□□□ 0.93
UPK1AO00322 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.88■□□□□ 0.93
UPK1AO00322 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.88■□□□□ 0.93
UPK1AO00322 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.88■□□□□ 0.93
UPK1AO00322 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
UPK1AO00322 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.88■□□□□ 0.93
UPK1AO00322 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
UPK1AO00322 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
UPK1AO00322 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
UPK1AO00322 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
UPK1AO00322 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms