Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.13■□□□□ 0.81
COL6A6A6NMZ7 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.13■□□□□ 0.81
COL6A6A6NMZ7 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
COL6A6A6NMZ7 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL6A6A6NMZ7 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.13■□□□□ 0.81
COL6A6A6NMZ7 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
COL6A6A6NMZ7 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
COL6A6A6NMZ7 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
COL6A6A6NMZ7 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
COL6A6A6NMZ7 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC20.12■□□□□ 0.81
COL6A6A6NMZ7 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
COL6A6A6NMZ7 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
COL6A6A6NMZ7 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
COL6A6A6NMZ7 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.12■□□□□ 0.81
COL6A6A6NMZ7 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
COL6A6A6NMZ7 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.12■□□□□ 0.81
COL6A6A6NMZ7 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
COL6A6A6NMZ7 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL6A6A6NMZ7 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
COL6A6A6NMZ7 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
COL6A6A6NMZ7 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
COL6A6A6NMZ7 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.11■□□□□ 0.81
COL6A6A6NMZ7 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC20.11■□□□□ 0.81
COL6A6A6NMZ7 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
COL6A6A6NMZ7 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.11■□□□□ 0.81
COL6A6A6NMZ7 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC20.11■□□□□ 0.81
COL6A6A6NMZ7 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL6A6A6NMZ7 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.11■□□□□ 0.81
COL6A6A6NMZ7 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC20.11■□□□□ 0.81
COL6A6A6NMZ7 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
COL6A6A6NMZ7 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
COL6A6A6NMZ7 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
COL6A6A6NMZ7 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
COL6A6A6NMZ7 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL6A6A6NMZ7 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.1■□□□□ 0.81
COL6A6A6NMZ7 AP006294.2-201ENST00000641667 209 ntBASIC20.1■□□□□ 0.81
COL6A6A6NMZ7 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL6A6A6NMZ7 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL6A6A6NMZ7 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.1■□□□□ 0.81
COL6A6A6NMZ7 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
COL6A6A6NMZ7 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
COL6A6A6NMZ7 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.1■□□□□ 0.81
COL6A6A6NMZ7 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
COL6A6A6NMZ7 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.1■□□□□ 0.81
COL6A6A6NMZ7 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL6A6A6NMZ7 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
COL6A6A6NMZ7 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
COL6A6A6NMZ7 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL6A6A6NMZ7 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
COL6A6A6NMZ7 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL6A6A6NMZ7 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL6A6A6NMZ7 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
COL6A6A6NMZ7 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.09■□□□□ 0.81
COL6A6A6NMZ7 AL596275.1-201ENST00000423464 877 ntBASIC20.09■□□□□ 0.81
COL6A6A6NMZ7 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.09■□□□□ 0.81
COL6A6A6NMZ7 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL6A6A6NMZ7 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.09■□□□□ 0.81
COL6A6A6NMZ7 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL6A6A6NMZ7 AC133552.2-202ENST00000575694 574 ntBASIC20.09■□□□□ 0.81
COL6A6A6NMZ7 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.09■□□□□ 0.81
COL6A6A6NMZ7 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.09■□□□□ 0.81
COL6A6A6NMZ7 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
COL6A6A6NMZ7 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
COL6A6A6NMZ7 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
COL6A6A6NMZ7 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
COL6A6A6NMZ7 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
COL6A6A6NMZ7 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
COL6A6A6NMZ7 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
COL6A6A6NMZ7 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
COL6A6A6NMZ7 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
COL6A6A6NMZ7 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.07■□□□□ 0.8
COL6A6A6NMZ7 DUSP5P2-201ENST00000426873 1033 ntBASIC20.07■□□□□ 0.8
COL6A6A6NMZ7 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL6A6A6NMZ7 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
COL6A6A6NMZ7 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL6A6A6NMZ7 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.07■□□□□ 0.8
COL6A6A6NMZ7 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
COL6A6A6NMZ7 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
COL6A6A6NMZ7 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.07■□□□□ 0.8
COL6A6A6NMZ7 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
COL6A6A6NMZ7 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL6A6A6NMZ7 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.07■□□□□ 0.8
COL6A6A6NMZ7 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.07■□□□□ 0.8
COL6A6A6NMZ7 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL6A6A6NMZ7 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.06■□□□□ 0.8
COL6A6A6NMZ7 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
COL6A6A6NMZ7 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.06■□□□□ 0.8
COL6A6A6NMZ7 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC20.06■□□□□ 0.8
COL6A6A6NMZ7 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.06■□□□□ 0.8
COL6A6A6NMZ7 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.06■□□□□ 0.8
COL6A6A6NMZ7 AC142381.4-202ENST00000563973 229 ntBASIC20.06■□□□□ 0.8
COL6A6A6NMZ7 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
COL6A6A6NMZ7 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
COL6A6A6NMZ7 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COL6A6A6NMZ7 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
COL6A6A6NMZ7 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
COL6A6A6NMZ7 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
COL6A6A6NMZ7 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
COL6A6A6NMZ7 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.06■□□□□ 0.8
COL6A6A6NMZ7 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms