Protein–RNA interactions for Protein: A0A0B4J272

TRAV24, T-cell receptor alpha variable 24 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV24A0A0B4J272 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TRAV24A0A0B4J272 VGF-203ENST00000611537 1622 ntTSL 5 BASIC18.52■□□□□ 0.55
TRAV24A0A0B4J272 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
TRAV24A0A0B4J272 AC139530.1-201ENST00000575312 1977 ntBASIC18.51■□□□□ 0.55
TRAV24A0A0B4J272 AC080038.3-201ENST00000623346 1952 ntBASIC18.51■□□□□ 0.55
TRAV24A0A0B4J272 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV24A0A0B4J272 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
TRAV24A0A0B4J272 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC18.51■□□□□ 0.55
TRAV24A0A0B4J272 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
TRAV24A0A0B4J272 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC18.51■□□□□ 0.55
TRAV24A0A0B4J272 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC18.51■□□□□ 0.55
TRAV24A0A0B4J272 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC18.51■□□□□ 0.55
TRAV24A0A0B4J272 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
TRAV24A0A0B4J272 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV24A0A0B4J272 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
TRAV24A0A0B4J272 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV24A0A0B4J272 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
TRAV24A0A0B4J272 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV24A0A0B4J272 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV24A0A0B4J272 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV24A0A0B4J272 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV24A0A0B4J272 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC18.5■□□□□ 0.55
TRAV24A0A0B4J272 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV24A0A0B4J272 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC18.5■□□□□ 0.55
TRAV24A0A0B4J272 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV24A0A0B4J272 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
TRAV24A0A0B4J272 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV24A0A0B4J272 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC18.5■□□□□ 0.55
TRAV24A0A0B4J272 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC18.5■□□□□ 0.55
TRAV24A0A0B4J272 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV24A0A0B4J272 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
TRAV24A0A0B4J272 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV24A0A0B4J272 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV24A0A0B4J272 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV24A0A0B4J272 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC18.49■□□□□ 0.55
TRAV24A0A0B4J272 AC004687.1-201ENST00000579003 1625 ntBASIC18.49■□□□□ 0.55
TRAV24A0A0B4J272 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV24A0A0B4J272 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC18.49■□□□□ 0.55
TRAV24A0A0B4J272 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV24A0A0B4J272 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC18.49■□□□□ 0.55
TRAV24A0A0B4J272 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV24A0A0B4J272 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV24A0A0B4J272 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC18.49■□□□□ 0.55
TRAV24A0A0B4J272 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV24A0A0B4J272 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV24A0A0B4J272 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
TRAV24A0A0B4J272 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV24A0A0B4J272 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
TRAV24A0A0B4J272 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV24A0A0B4J272 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV24A0A0B4J272 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV24A0A0B4J272 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
TRAV24A0A0B4J272 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV24A0A0B4J272 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV24A0A0B4J272 KRT16P3-201ENST00000439127 1283 ntBASIC18.48■□□□□ 0.55
TRAV24A0A0B4J272 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV24A0A0B4J272 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV24A0A0B4J272 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV24A0A0B4J272 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV24A0A0B4J272 LINC01960-201ENST00000563759 1884 ntBASIC18.48■□□□□ 0.55
TRAV24A0A0B4J272 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV24A0A0B4J272 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV24A0A0B4J272 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV24A0A0B4J272 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV24A0A0B4J272 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV24A0A0B4J272 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
TRAV24A0A0B4J272 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV24A0A0B4J272 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV24A0A0B4J272 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.47■□□□□ 0.55
TRAV24A0A0B4J272 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
TRAV24A0A0B4J272 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV24A0A0B4J272 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC18.47■□□□□ 0.55
TRAV24A0A0B4J272 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC18.47■□□□□ 0.55
TRAV24A0A0B4J272 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV24A0A0B4J272 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC18.47■□□□□ 0.55
TRAV24A0A0B4J272 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV24A0A0B4J272 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV24A0A0B4J272 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV24A0A0B4J272 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV24A0A0B4J272 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
TRAV24A0A0B4J272 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC18.46■□□□□ 0.55
TRAV24A0A0B4J272 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV24A0A0B4J272 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV24A0A0B4J272 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV24A0A0B4J272 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV24A0A0B4J272 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV24A0A0B4J272 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC18.46■□□□□ 0.55
TRAV24A0A0B4J272 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV24A0A0B4J272 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
TRAV24A0A0B4J272 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC18.46■□□□□ 0.55
TRAV24A0A0B4J272 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV24A0A0B4J272 AL117332.1-201ENST00000622628 974 ntBASIC18.46■□□□□ 0.55
TRAV24A0A0B4J272 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC18.46■□□□□ 0.55
TRAV24A0A0B4J272 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV24A0A0B4J272 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV24A0A0B4J272 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV24A0A0B4J272 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
TRAV24A0A0B4J272 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV24A0A0B4J272 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.54
TRAV24A0A0B4J272 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms