Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV5A0A0B4J249 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV5A0A0B4J249 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TRAV5A0A0B4J249 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV5A0A0B4J249 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV5A0A0B4J249 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC17.12■□□□□ 0.33
TRAV5A0A0B4J249 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV5A0A0B4J249 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV5A0A0B4J249 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV5A0A0B4J249 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
TRAV5A0A0B4J249 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV5A0A0B4J249 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV5A0A0B4J249 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV5A0A0B4J249 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
TRAV5A0A0B4J249 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV5A0A0B4J249 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TRAV5A0A0B4J249 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC17.11■□□□□ 0.33
TRAV5A0A0B4J249 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV5A0A0B4J249 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
TRAV5A0A0B4J249 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV5A0A0B4J249 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC17.1■□□□□ 0.33
TRAV5A0A0B4J249 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV5A0A0B4J249 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV5A0A0B4J249 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC17.1■□□□□ 0.33
TRAV5A0A0B4J249 KRT18P24-201ENST00000344739 1156 ntBASIC17.1■□□□□ 0.33
TRAV5A0A0B4J249 IDNK-201ENST00000376417 511 ntTSL 5 BASIC17.1■□□□□ 0.33
TRAV5A0A0B4J249 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV5A0A0B4J249 HSD17B1P1-201ENST00000590052 955 ntBASIC17.1■□□□□ 0.33
TRAV5A0A0B4J249 PVT1_1.1-201ENST00000615125 194 ntBASIC17.1■□□□□ 0.33
TRAV5A0A0B4J249 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV5A0A0B4J249 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV5A0A0B4J249 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
TRAV5A0A0B4J249 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC17.1■□□□□ 0.33
TRAV5A0A0B4J249 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV5A0A0B4J249 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC17.09■□□□□ 0.33
TRAV5A0A0B4J249 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC17.09■□□□□ 0.33
TRAV5A0A0B4J249 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC17.09■□□□□ 0.33
TRAV5A0A0B4J249 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC17.09■□□□□ 0.33
TRAV5A0A0B4J249 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
TRAV5A0A0B4J249 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV5A0A0B4J249 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV5A0A0B4J249 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV5A0A0B4J249 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV5A0A0B4J249 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC17.08■□□□□ 0.33
TRAV5A0A0B4J249 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRAV5A0A0B4J249 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRAV5A0A0B4J249 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRAV5A0A0B4J249 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV5A0A0B4J249 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC17.08■□□□□ 0.32
TRAV5A0A0B4J249 AC144652.1-201ENST00000609974 1624 ntBASIC17.08■□□□□ 0.32
TRAV5A0A0B4J249 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV5A0A0B4J249 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV5A0A0B4J249 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV5A0A0B4J249 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC17.08■□□□□ 0.32
TRAV5A0A0B4J249 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC17.08■□□□□ 0.32
TRAV5A0A0B4J249 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV5A0A0B4J249 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV5A0A0B4J249 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC17.08■□□□□ 0.32
TRAV5A0A0B4J249 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV5A0A0B4J249 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV5A0A0B4J249 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV5A0A0B4J249 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC17.07■□□□□ 0.32
TRAV5A0A0B4J249 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV5A0A0B4J249 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC17.07■□□□□ 0.32
TRAV5A0A0B4J249 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV5A0A0B4J249 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV5A0A0B4J249 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
TRAV5A0A0B4J249 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV5A0A0B4J249 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
TRAV5A0A0B4J249 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
TRAV5A0A0B4J249 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC17.06■□□□□ 0.32
TRAV5A0A0B4J249 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV5A0A0B4J249 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV5A0A0B4J249 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV5A0A0B4J249 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV5A0A0B4J249 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV5A0A0B4J249 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV5A0A0B4J249 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
TRAV5A0A0B4J249 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV5A0A0B4J249 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC17.06■□□□□ 0.32
TRAV5A0A0B4J249 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV5A0A0B4J249 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV5A0A0B4J249 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV5A0A0B4J249 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
TRAV5A0A0B4J249 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC17.06■□□□□ 0.32
TRAV5A0A0B4J249 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV5A0A0B4J249 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV5A0A0B4J249 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC17.06■□□□□ 0.32
TRAV5A0A0B4J249 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV5A0A0B4J249 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV5A0A0B4J249 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
TRAV5A0A0B4J249 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV5A0A0B4J249 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
TRAV5A0A0B4J249 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV5A0A0B4J249 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
TRAV5A0A0B4J249 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
TRAV5A0A0B4J249 REST-206ENST00000612429 1376 ntTSL 5 BASIC17.05■□□□□ 0.32
TRAV5A0A0B4J249 REST-207ENST00000616975 1370 ntTSL 5 BASIC17.05■□□□□ 0.32
TRAV5A0A0B4J249 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV5A0A0B4J249 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms