Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 CYLD-214ENST00000569418 3513 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
VPS13DQ5THJ4 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC8.45□□□□□ -1.06
VPS13DQ5THJ4 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC8.45□□□□□ -1.06
VPS13DQ5THJ4 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
VPS13DQ5THJ4 FMO1-203ENST00000402921 2003 ntTSL 2 BASIC8.45□□□□□ -1.06
VPS13DQ5THJ4 SIRT4-201ENST00000202967 1217 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
VPS13DQ5THJ4 SULT1A2-201ENST00000335715 1090 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
VPS13DQ5THJ4 APOBEC3H-202ENST00000401756 1023 ntAPPRIS ALT2 TSL 3 BASIC8.45□□□□□ -1.06
VPS13DQ5THJ4 AL355298.1-201ENST00000425391 180 ntBASIC8.45□□□□□ -1.06
VPS13DQ5THJ4 ADH5P2-201ENST00000425922 1124 ntBASIC8.45□□□□□ -1.06
VPS13DQ5THJ4 AL355309.1-201ENST00000442158 78 ntBASIC8.45□□□□□ -1.06
VPS13DQ5THJ4 APOBEC3H-204ENST00000442487 988 ntAPPRIS P3 TSL 3 BASIC8.45□□□□□ -1.06
VPS13DQ5THJ4 AC016735.1-201ENST00000457457 237 ntTSL 2 BASIC8.45□□□□□ -1.06
VPS13DQ5THJ4 TMEM161B-AS1-204ENST00000504636 1039 ntTSL 2 BASIC8.45□□□□□ -1.06
VPS13DQ5THJ4 DENND5B-AS1-202ENST00000537346 1106 ntTSL 3 BASIC8.45□□□□□ -1.06
VPS13DQ5THJ4 AC091132.3-201ENST00000579701 470 ntBASIC8.45□□□□□ -1.06
VPS13DQ5THJ4 AC138645.1-201ENST00000582765 470 ntBASIC8.45□□□□□ -1.06
VPS13DQ5THJ4 AL137785.1-201ENST00000637466 490 ntTSL 5 BASIC8.45□□□□□ -1.06
VPS13DQ5THJ4 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC8.45□□□□□ -1.06
VPS13DQ5THJ4 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
VPS13DQ5THJ4 FAM117A-209ENST00000513602 1522 ntAPPRIS ALT2 TSL 2 BASIC8.45□□□□□ -1.06
VPS13DQ5THJ4 RNF34-203ENST00000392465 2051 ntAPPRIS P3 TSL 5 BASIC8.44□□□□□ -1.06
VPS13DQ5THJ4 AL365259.1-204ENST00000606001 2635 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
VPS13DQ5THJ4 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
VPS13DQ5THJ4 IQCD-201ENST00000299732 1369 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
VPS13DQ5THJ4 PALM2-201ENST00000314527 1332 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
VPS13DQ5THJ4 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
VPS13DQ5THJ4 VAV1-207ENST00000599806 2717 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
VPS13DQ5THJ4 ANGEL1-205ENST00000557179 1427 ntTSL 2 BASIC8.44□□□□□ -1.06
VPS13DQ5THJ4 CT62-203ENST00000566432 2822 ntAPPRIS ALT2 TSL 2 BASIC8.44□□□□□ -1.06
VPS13DQ5THJ4 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
VPS13DQ5THJ4 SNORA9B-201ENST00000384170 133 ntBASIC8.44□□□□□ -1.06
VPS13DQ5THJ4 PRAMEF35P-201ENST00000458709 891 ntBASIC8.44□□□□□ -1.06
VPS13DQ5THJ4 AC044839.1-201ENST00000532307 541 ntTSL 5 BASIC8.44□□□□□ -1.06
VPS13DQ5THJ4 AP002478.2-201ENST00000584060 557 ntTSL 4 BASIC8.44□□□□□ -1.06
VPS13DQ5THJ4 RN7SL491P-201ENST00000584748 269 ntBASIC8.44□□□□□ -1.06
VPS13DQ5THJ4 AC083841.4-201ENST00000637396 352 ntBASIC8.44□□□□□ -1.06
VPS13DQ5THJ4 AC068234.1-201ENST00000560629 2785 ntAPPRIS P1 TSL 2 BASIC8.44□□□□□ -1.06
VPS13DQ5THJ4 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
VPS13DQ5THJ4 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC8.44□□□□□ -1.06
VPS13DQ5THJ4 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC8.44□□□□□ -1.06
VPS13DQ5THJ4 TBC1D3F-201ENST00000620210 2117 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
VPS13DQ5THJ4 AC092809.4-201ENST00000420350 1323 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
VPS13DQ5THJ4 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
VPS13DQ5THJ4 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC8.44□□□□□ -1.06
VPS13DQ5THJ4 LAIR1-204ENST00000391743 2735 ntAPPRIS ALT2 TSL 2 BASIC8.44□□□□□ -1.06
VPS13DQ5THJ4 UBE2A-210ENST00000630695 1771 ntTSL 4 BASIC8.44□□□□□ -1.06
VPS13DQ5THJ4 TMEM106B-202ENST00000396668 2126 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
VPS13DQ5THJ4 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
VPS13DQ5THJ4 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
VPS13DQ5THJ4 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC8.44□□□□□ -1.06
VPS13DQ5THJ4 OR8B8-201ENST00000328064 1033 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
VPS13DQ5THJ4 IGLV4-60-201ENST00000390284 362 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
VPS13DQ5THJ4 CTSLP1-201ENST00000457530 1002 ntBASIC8.44□□□□□ -1.06
VPS13DQ5THJ4 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
VPS13DQ5THJ4 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC8.44□□□□□ -1.06
VPS13DQ5THJ4 GNL3-201ENST00000394799 2041 ntAPPRIS ALT2 TSL 2 BASIC8.44□□□□□ -1.06
VPS13DQ5THJ4 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
VPS13DQ5THJ4 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
VPS13DQ5THJ4 THEGL-202ENST00000512175 1650 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
VPS13DQ5THJ4 BTN2A2-206ENST00000469230 1790 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
VPS13DQ5THJ4 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
VPS13DQ5THJ4 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
VPS13DQ5THJ4 ZNF670-201ENST00000366503 1994 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
VPS13DQ5THJ4 CLEC17A-203ENST00000547437 2065 ntTSL 2 BASIC8.44□□□□□ -1.06
VPS13DQ5THJ4 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC8.44□□□□□ -1.06
VPS13DQ5THJ4 FAM98A-202ENST00000403368 2818 ntTSL 2 BASIC8.44□□□□□ -1.06
VPS13DQ5THJ4 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
VPS13DQ5THJ4 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
VPS13DQ5THJ4 C1QTNF9B-202ENST00000382140 1825 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
VPS13DQ5THJ4 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
VPS13DQ5THJ4 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
VPS13DQ5THJ4 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
VPS13DQ5THJ4 FAM238A-201ENST00000412114 1091 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
VPS13DQ5THJ4 AL139412.1-201ENST00000441085 523 ntTSL 2 BASIC8.44□□□□□ -1.06
VPS13DQ5THJ4 HYI-AS1-201ENST00000444386 545 ntTSL 2 BASIC8.44□□□□□ -1.06
VPS13DQ5THJ4 HNRNPA1P62-201ENST00000559372 952 ntBASIC8.44□□□□□ -1.06
VPS13DQ5THJ4 GSG1L-205ENST00000569166 585 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
VPS13DQ5THJ4 CU638689.3-201ENST00000624266 1031 ntBASIC8.44□□□□□ -1.06
VPS13DQ5THJ4 CYP24A1-203ENST00000395955 2227 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
VPS13DQ5THJ4 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC8.44□□□□□ -1.06
VPS13DQ5THJ4 AL136379.1-201ENST00000623471 2642 ntBASIC8.44□□□□□ -1.06
VPS13DQ5THJ4 AL355336.1-201ENST00000451355 1676 ntTSL 2 BASIC8.44□□□□□ -1.06
VPS13DQ5THJ4 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
VPS13DQ5THJ4 CRHR1-206ENST00000398285 2399 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
VPS13DQ5THJ4 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC8.44□□□□□ -1.06
VPS13DQ5THJ4 AC010327.5-201ENST00000586923 3061 ntBASIC8.44□□□□□ -1.06
VPS13DQ5THJ4 EPB41L2-204ENST00000392427 3369 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
VPS13DQ5THJ4 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
VPS13DQ5THJ4 HYPK-203ENST00000458412 1712 ntAPPRIS ALT2 TSL 2 BASIC8.44□□□□□ -1.06
VPS13DQ5THJ4 LIN28B-203ENST00000637759 2635 ntTSL 5 BASIC8.44□□□□□ -1.06
VPS13DQ5THJ4 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
VPS13DQ5THJ4 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
VPS13DQ5THJ4 MIR219A2-202ENST00000385220 97 ntBASIC8.43□□□□□ -1.06
VPS13DQ5THJ4 CNN2P9-201ENST00000417134 909 ntBASIC8.43□□□□□ -1.06
VPS13DQ5THJ4 AC245517.1-201ENST00000444224 1262 ntBASIC8.43□□□□□ -1.06
VPS13DQ5THJ4 AL358115.1-202ENST00000455257 675 ntTSL 3 BASIC8.43□□□□□ -1.06
VPS13DQ5THJ4 AC022424.2-201ENST00000514848 454 ntTSL 2 BASIC8.43□□□□□ -1.06
VPS13DQ5THJ4 RPS20-208ENST00000521262 650 ntAPPRIS P1 TSL 2 BASIC8.43□□□□□ -1.06
VPS13DQ5THJ4 AC021439.1-201ENST00000562975 591 ntTSL 4 BASIC8.43□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms