Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC8.29□□□□□ -1.08
PCP4P48539 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC8.29□□□□□ -1.08
PCP4P48539 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
PCP4P48539 KRT18P29-201ENST00000397031 1267 ntBASIC8.29□□□□□ -1.08
PCP4P48539 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
PCP4P48539 TSPY5P-201ENST00000426936 936 ntBASIC8.29□□□□□ -1.08
PCP4P48539 SAPCD2P2-201ENST00000431719 1174 ntBASIC8.29□□□□□ -1.08
PCP4P48539 DUX4L9-201ENST00000449051 1259 ntBASIC8.29□□□□□ -1.08
PCP4P48539 IGHVII-26-2-201ENST00000518751 325 ntBASIC8.29□□□□□ -1.08
PCP4P48539 IGHVIII-5-2-201ENST00000522505 261 ntBASIC8.29□□□□□ -1.08
PCP4P48539 AC104390.1-201ENST00000555663 520 ntBASIC8.29□□□□□ -1.08
PCP4P48539 AC243562.2-201ENST00000561247 970 ntBASIC8.29□□□□□ -1.08
PCP4P48539 DUX4L2-201ENST00000561772 1275 ntBASIC8.29□□□□□ -1.08
PCP4P48539 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
PCP4P48539 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC8.29□□□□□ -1.08
PCP4P48539 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC8.29□□□□□ -1.08
PCP4P48539 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC8.29□□□□□ -1.08
PCP4P48539 AL031670.1-201ENST00000619343 669 ntTSL 3 BASIC8.29□□□□□ -1.08
PCP4P48539 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC8.29□□□□□ -1.08
PCP4P48539 DUX4L6-201ENST00000626483 1275 ntBASIC8.29□□□□□ -1.08
PCP4P48539 DUX4L1-201ENST00000627662 1275 ntBASIC8.29□□□□□ -1.08
PCP4P48539 DUX4L8-201ENST00000629013 1275 ntBASIC8.29□□□□□ -1.08
PCP4P48539 DUX4L3-201ENST00000630187 1275 ntBASIC8.29□□□□□ -1.08
PCP4P48539 DUX4L7-201ENST00000630678 1275 ntBASIC8.29□□□□□ -1.08
PCP4P48539 DUX4L5-201ENST00000630834 1275 ntBASIC8.29□□□□□ -1.08
PCP4P48539 HLA-B-256ENST00000639848 1089 ntBASIC8.29□□□□□ -1.08
PCP4P48539 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC8.29□□□□□ -1.08
PCP4P48539 CYFIP1-203ENST00000610365 4515 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
PCP4P48539 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC8.29□□□□□ -1.08
PCP4P48539 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC8.29□□□□□ -1.08
PCP4P48539 UBE2A-210ENST00000630695 1771 ntTSL 4 BASIC8.29□□□□□ -1.08
PCP4P48539 TAS1R1-202ENST00000351136 1871 ntTSL 2 BASIC8.29□□□□□ -1.08
PCP4P48539 TRPC5-201ENST00000262839 5839 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
PCP4P48539 TBC1D22A-AS1-202ENST00000640274 1951 ntBASIC8.29□□□□□ -1.08
PCP4P48539 FAM186B-205ENST00000551047 2173 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
PCP4P48539 CLIP4-204ENST00000404424 2480 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
PCP4P48539 LINC01304-204ENST00000454455 2454 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
PCP4P48539 LRRC40-201ENST00000370952 2884 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
PCP4P48539 DOCK8-209ENST00000469391 6386 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
PCP4P48539 JAKMIP2-206ENST00000616793 9272 ntAPPRIS ALT1 TSL 5 BASIC8.29□□□□□ -1.08
PCP4P48539 ANKFY1-209ENST00000574367 5033 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
PCP4P48539 CTNNA2-201ENST00000343114 2927 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
PCP4P48539 TMEM241-201ENST00000383233 2934 ntAPPRIS P2 TSL 1 (best) BASIC8.29□□□□□ -1.08
PCP4P48539 ZNF114-201ENST00000315849 2206 ntAPPRIS P1 TSL 2 BASIC8.29□□□□□ -1.08
PCP4P48539 CNR1-206ENST00000549890 2122 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
PCP4P48539 ZNF23-204ENST00000428724 1932 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
PCP4P48539 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
PCP4P48539 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC8.29□□□□□ -1.08
PCP4P48539 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC8.29□□□□□ -1.08
PCP4P48539 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
PCP4P48539 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
PCP4P48539 LGMNP1-201ENST00000441282 1300 ntBASIC8.29□□□□□ -1.08
PCP4P48539 RNF185-202ENST00000326132 3171 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
PCP4P48539 LINC00562-201ENST00000566385 2470 ntBASIC8.28□□□□□ -1.08
PCP4P48539 SHOC2-202ENST00000369452 3943 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
PCP4P48539 TCF4-211ENST00000561992 2184 ntTSL 2 BASIC8.28□□□□□ -1.08
PCP4P48539 AC048380.2-201ENST00000624725 3548 ntBASIC8.28□□□□□ -1.08
PCP4P48539 UHRF1BP1-201ENST00000192788 9570 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.08
PCP4P48539 NOS2-201ENST00000313735 4176 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
PCP4P48539 LINC02067-201ENST00000473595 2845 ntTSL 2 BASIC8.28□□□□□ -1.08
PCP4P48539 LRRC6-201ENST00000250173 1672 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
PCP4P48539 DDX11L10-202ENST00000513886 1652 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
PCP4P48539 LRRC6-203ENST00000518642 1674 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
PCP4P48539 BPNT1-205ENST00000469520 2737 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
PCP4P48539 RALYL-205ENST00000521268 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
PCP4P48539 VPS13A-203ENST00000360280 15320 ntAPPRIS P4 TSL 1 (best) BASIC8.28□□□□□ -1.08
PCP4P48539 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
PCP4P48539 GLT8D2-202ENST00000546436 1578 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
PCP4P48539 SCRN1-201ENST00000242059 5257 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
PCP4P48539 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
PCP4P48539 TNC-210ENST00000535648 7508 ntTSL 5 BASIC8.28□□□□□ -1.08
PCP4P48539 KIF24-201ENST00000379174 5729 ntTSL 5 BASIC8.28□□□□□ -1.08
PCP4P48539 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
PCP4P48539 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
PCP4P48539 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
PCP4P48539 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
PCP4P48539 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC8.28□□□□□ -1.08
PCP4P48539 MRPL36-201ENST00000382647 587 ntAPPRIS P1 TSL 3 BASIC8.28□□□□□ -1.08
PCP4P48539 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
PCP4P48539 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
PCP4P48539 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC8.28□□□□□ -1.08
PCP4P48539 KRT19P4-201ENST00000443208 943 ntBASIC8.28□□□□□ -1.08
PCP4P48539 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC8.28□□□□□ -1.08
PCP4P48539 RPS2P52-201ENST00000469610 820 ntBASIC8.28□□□□□ -1.08
PCP4P48539 PPFIBP2-216ENST00000530181 2965 ntAPPRIS ALT2 TSL 2 BASIC8.28□□□□□ -1.08
PCP4P48539 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
PCP4P48539 AC048382.1-201ENST00000542197 1018 ntTSL 5 BASIC8.28□□□□□ -1.08
PCP4P48539 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC8.28□□□□□ -1.08
PCP4P48539 ABCD1P3-201ENST00000562927 605 ntBASIC8.28□□□□□ -1.08
PCP4P48539 AL080250.1-203ENST00000607799 747 ntTSL 2 BASIC8.28□□□□□ -1.08
PCP4P48539 AC009154.2-201ENST00000621177 724 ntBASIC8.28□□□□□ -1.08
PCP4P48539 AC132154.1-201ENST00000623248 2134 ntBASIC8.28□□□□□ -1.08
PCP4P48539 AL355306.2-203ENST00000635102 1025 ntTSL 5 BASIC8.28□□□□□ -1.08
PCP4P48539 TOP1-201ENST00000361337 3738 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
PCP4P48539 DDX53-201ENST00000327968 3629 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
PCP4P48539 GID8-201ENST00000266069 4397 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
PCP4P48539 AC012354.1-201ENST00000425325 2685 ntTSL 3 BASIC8.28□□□□□ -1.08
PCP4P48539 NAP1L3-202ENST00000475430 2555 ntAPPRIS ALT2 TSL 2 BASIC8.28□□□□□ -1.08
PCP4P48539 TMEM51-AS1-201ENST00000310916 7100 ntTSL 2 BASIC8.28□□□□□ -1.08
PCP4P48539 AC022034.2-201ENST00000426023 2387 ntTSL 2 BASIC8.28□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms