Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
HMG20BQ9P0W2 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HMG20BQ9P0W2 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HMG20BQ9P0W2 EHMT2-203ENST00000375537 3965 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
HMG20BQ9P0W2 LILRP2-202ENST00000413572 1383 ntBASIC16.15■□□□□ 0.18
HMG20BQ9P0W2 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
HMG20BQ9P0W2 AC007389.3-201ENST00000420724 1656 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HMG20BQ9P0W2 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
HMG20BQ9P0W2 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC16.15■□□□□ 0.18
HMG20BQ9P0W2 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
HMG20BQ9P0W2 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HMG20BQ9P0W2 VMP1-201ENST00000262291 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HMG20BQ9P0W2 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HMG20BQ9P0W2 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HMG20BQ9P0W2 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
HMG20BQ9P0W2 PMM1-201ENST00000216259 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HMG20BQ9P0W2 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HMG20BQ9P0W2 KRTAP10-11-201ENST00000334670 1237 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
HMG20BQ9P0W2 HIST2H2BE-201ENST00000369155 2194 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
HMG20BQ9P0W2 MRPL55-219ENST00000391867 685 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
HMG20BQ9P0W2 KCNE1-202ENST00000399284 666 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
HMG20BQ9P0W2 SNHG14-201ENST00000414175 610 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HMG20BQ9P0W2 IQCF4-203ENST00000428561 420 ntBASIC16.15■□□□□ 0.18
HMG20BQ9P0W2 HNRNPA1P10-201ENST00000444945 962 ntBASIC16.15■□□□□ 0.18
HMG20BQ9P0W2 AC128689.1-202ENST00000459861 827 ntTSL 3 BASIC16.15■□□□□ 0.18
HMG20BQ9P0W2 RPS18P9-201ENST00000482817 460 ntBASIC16.15■□□□□ 0.18
HMG20BQ9P0W2 PIGG-205ENST00000503111 2629 ntTSL 2 BASIC16.15■□□□□ 0.18
HMG20BQ9P0W2 AC137579.2-201ENST00000517714 551 ntTSL 4 BASIC16.15■□□□□ 0.18
HMG20BQ9P0W2 AC009055.1-201ENST00000562656 781 ntTSL 3 BASIC16.15■□□□□ 0.18
HMG20BQ9P0W2 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HMG20BQ9P0W2 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC16.15■□□□□ 0.18
HMG20BQ9P0W2 AC092171.2-201ENST00000444210 3251 ntTSL 5 BASIC16.15■□□□□ 0.18
HMG20BQ9P0W2 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HMG20BQ9P0W2 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HMG20BQ9P0W2 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HMG20BQ9P0W2 AP000787.1-205ENST00000536683 1485 ntTSL 5 BASIC16.15■□□□□ 0.18
HMG20BQ9P0W2 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HMG20BQ9P0W2 F10-201ENST00000375551 1509 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
HMG20BQ9P0W2 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HMG20BQ9P0W2 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC16.14■□□□□ 0.17
HMG20BQ9P0W2 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC16.14■□□□□ 0.17
HMG20BQ9P0W2 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
HMG20BQ9P0W2 FAM183BP-201ENST00000409072 1595 ntBASIC16.14■□□□□ 0.17
HMG20BQ9P0W2 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HMG20BQ9P0W2 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HMG20BQ9P0W2 PLEKHG6-202ENST00000304581 1424 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HMG20BQ9P0W2 GOSR2-209ENST00000575949 1444 ntTSL 2 BASIC16.14■□□□□ 0.17
HMG20BQ9P0W2 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HMG20BQ9P0W2 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HMG20BQ9P0W2 TRPM3-205ENST00000361823 1260 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HMG20BQ9P0W2 PITHD1-202ENST00000374524 1292 ntTSL 3 BASIC16.14■□□□□ 0.17
HMG20BQ9P0W2 RPS7-202ENST00000403564 764 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
HMG20BQ9P0W2 SAPCD1-AS1-202ENST00000419679 461 ntTSL 3 BASIC16.14■□□□□ 0.17
HMG20BQ9P0W2 HDHD5-AS1-202ENST00000431923 616 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HMG20BQ9P0W2 IGHV3-43-201ENST00000434710 434 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
HMG20BQ9P0W2 CMPK1-204ENST00000450808 950 ntTSL 2 BASIC16.14■□□□□ 0.17
HMG20BQ9P0W2 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
HMG20BQ9P0W2 AC099524.1-203ENST00000565272 756 ntTSL 5 BASIC16.14■□□□□ 0.17
HMG20BQ9P0W2 HNRNPA1P16-201ENST00000575692 955 ntBASIC16.14■□□□□ 0.17
HMG20BQ9P0W2 AC008747.1-201ENST00000592220 442 ntTSL 3 BASIC16.14■□□□□ 0.17
HMG20BQ9P0W2 AC093503.1-201ENST00000593888 495 ntTSL 3 BASIC16.14■□□□□ 0.17
HMG20BQ9P0W2 RNF146-211ENST00000609447 607 ntTSL 4 BASIC16.14■□□□□ 0.17
HMG20BQ9P0W2 AL591424.3-201ENST00000614278 872 ntBASIC16.14■□□□□ 0.17
HMG20BQ9P0W2 LINC02498-201ENST00000635390 1065 ntTSL 5 BASIC16.14■□□□□ 0.17
HMG20BQ9P0W2 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
HMG20BQ9P0W2 COPS5-203ENST00000517736 1621 ntTSL 5 BASIC16.14■□□□□ 0.17
HMG20BQ9P0W2 CICP20-201ENST00000443330 2801 ntBASIC16.14■□□□□ 0.17
HMG20BQ9P0W2 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HMG20BQ9P0W2 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
HMG20BQ9P0W2 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
HMG20BQ9P0W2 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
HMG20BQ9P0W2 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC16.14■□□□□ 0.17
HMG20BQ9P0W2 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HMG20BQ9P0W2 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC16.14■□□□□ 0.17
HMG20BQ9P0W2 FAM13B-203ENST00000425075 3098 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HMG20BQ9P0W2 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HMG20BQ9P0W2 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HMG20BQ9P0W2 LYPLA1-202ENST00000343231 1308 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HMG20BQ9P0W2 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HMG20BQ9P0W2 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
HMG20BQ9P0W2 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HMG20BQ9P0W2 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC16.13■□□□□ 0.17
HMG20BQ9P0W2 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HMG20BQ9P0W2 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HMG20BQ9P0W2 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HMG20BQ9P0W2 CFAP65-204ENST00000410037 2703 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
HMG20BQ9P0W2 BCCIP-203ENST00000368759 1433 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HMG20BQ9P0W2 CCDC149-208ENST00000635206 2362 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
HMG20BQ9P0W2 IL10-202ENST00000423557 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HMG20BQ9P0W2 KLC4-203ENST00000394056 2770 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
HMG20BQ9P0W2 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HMG20BQ9P0W2 AC022364.1-202ENST00000617468 2409 ntBASIC16.13■□□□□ 0.17
HMG20BQ9P0W2 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HMG20BQ9P0W2 PRDX1-202ENST00000319248 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HMG20BQ9P0W2 REG3G-202ENST00000393897 856 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HMG20BQ9P0W2 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HMG20BQ9P0W2 KRT19P4-201ENST00000443208 943 ntBASIC16.13■□□□□ 0.17
HMG20BQ9P0W2 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC16.13■□□□□ 0.17
HMG20BQ9P0W2 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC16.13■□□□□ 0.17
HMG20BQ9P0W2 AC114781.1-201ENST00000450559 1028 ntBASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms