Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 HNRNPLP1-201ENST00000421896 1501 ntBASIC16.24■□□□□ 0.19
PDE6BP35913 KIR3DL3-201ENST00000291860 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PDE6BP35913 AC005912.2-201ENST00000619492 2400 ntBASIC16.24■□□□□ 0.19
PDE6BP35913 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PDE6BP35913 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC16.24■□□□□ 0.19
PDE6BP35913 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC16.24■□□□□ 0.19
PDE6BP35913 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PDE6BP35913 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
PDE6BP35913 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC16.23■□□□□ 0.19
PDE6BP35913 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC16.23■□□□□ 0.19
PDE6BP35913 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
PDE6BP35913 AC008040.5-201ENST00000599781 1781 ntBASIC16.23■□□□□ 0.19
PDE6BP35913 AL359845.1-201ENST00000458202 1648 ntBASIC16.23■□□□□ 0.19
PDE6BP35913 NBEAP3-201ENST00000420638 1493 ntBASIC16.23■□□□□ 0.19
PDE6BP35913 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC16.23■□□□□ 0.19
PDE6BP35913 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PDE6BP35913 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PDE6BP35913 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
PDE6BP35913 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
PDE6BP35913 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PDE6BP35913 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC16.23■□□□□ 0.19
PDE6BP35913 RDX-218ENST00000544551 4117 ntTSL 2 BASIC16.23■□□□□ 0.19
PDE6BP35913 SPTLC1P3-201ENST00000403408 259 ntBASIC16.23■□□□□ 0.19
PDE6BP35913 SLC25A6P1-201ENST00000412123 775 ntBASIC16.23■□□□□ 0.19
PDE6BP35913 RBPMSLP-201ENST00000433427 502 ntBASIC16.23■□□□□ 0.19
PDE6BP35913 AC009312.1-201ENST00000457110 592 ntTSL 4 BASIC16.23■□□□□ 0.19
PDE6BP35913 RASGRF2-AS1-202ENST00000505694 535 ntTSL 3 BASIC16.23■□□□□ 0.19
PDE6BP35913 SLC10A7-208ENST00000511374 869 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PDE6BP35913 TATDN3-208ENST00000526997 794 ntTSL 3 BASIC16.23■□□□□ 0.19
PDE6BP35913 TATDN3-213ENST00000531963 1291 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PDE6BP35913 AC136475.6-201ENST00000533113 289 ntBASIC16.23■□□□□ 0.19
PDE6BP35913 DERL2-206ENST00000572834 589 ntTSL 3 BASIC16.23■□□□□ 0.19
PDE6BP35913 AC103810.4-201ENST00000578601 257 ntBASIC16.23■□□□□ 0.19
PDE6BP35913 RPSAP67-201ENST00000584105 862 ntBASIC16.23■□□□□ 0.19
PDE6BP35913 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC16.23■□□□□ 0.19
PDE6BP35913 AC015912.3-201ENST00000619432 348 ntBASIC16.23■□□□□ 0.19
PDE6BP35913 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC16.23■□□□□ 0.19
PDE6BP35913 AC079331.1-201ENST00000623200 1200 ntBASIC16.23■□□□□ 0.19
PDE6BP35913 AC099552.4-201ENST00000624248 949 ntBASIC16.23■□□□□ 0.19
PDE6BP35913 PAX6-238ENST00000638755 1161 ntTSL 5 BASIC16.23■□□□□ 0.19
PDE6BP35913 SLC4A11-207ENST00000539553 2832 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
PDE6BP35913 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PDE6BP35913 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
PDE6BP35913 GMPR2-201ENST00000348719 1684 ntTSL 5 BASIC16.23■□□□□ 0.19
PDE6BP35913 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC16.23■□□□□ 0.19
PDE6BP35913 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
PDE6BP35913 NFATC4-212ENST00000554473 1382 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PDE6BP35913 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PDE6BP35913 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC16.23■□□□□ 0.19
PDE6BP35913 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PDE6BP35913 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
PDE6BP35913 ABCD1P2-201ENST00000429313 1601 ntBASIC16.23■□□□□ 0.19
PDE6BP35913 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
PDE6BP35913 TESPA1-202ENST00000449076 2010 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
PDE6BP35913 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PDE6BP35913 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PDE6BP35913 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
PDE6BP35913 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC16.22■□□□□ 0.19
PDE6BP35913 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC16.22■□□□□ 0.19
PDE6BP35913 AC073585.1-201ENST00000368895 1328 ntBASIC16.22■□□□□ 0.19
PDE6BP35913 TPD52L3-203ENST00000381428 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDE6BP35913 AC099689.1-201ENST00000624383 1302 ntBASIC16.22■□□□□ 0.19
PDE6BP35913 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
PDE6BP35913 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDE6BP35913 SNRNP27-201ENST00000244227 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDE6BP35913 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC16.22■□□□□ 0.19
PDE6BP35913 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC16.22■□□□□ 0.19
PDE6BP35913 CDC20-201ENST00000310955 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDE6BP35913 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDE6BP35913 MYL7-201ENST00000223364 612 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDE6BP35913 CRYGD-201ENST00000264376 619 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDE6BP35913 TPM3P7-201ENST00000338274 732 ntBASIC16.22■□□□□ 0.19
PDE6BP35913 NDUFS5-201ENST00000372967 544 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDE6BP35913 NDUFS5-202ENST00000372969 548 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDE6BP35913 FTH1P19-201ENST00000402402 528 ntBASIC16.22■□□□□ 0.19
PDE6BP35913 RPL19P20-201ENST00000415648 591 ntBASIC16.22■□□□□ 0.19
PDE6BP35913 AL359094.2-201ENST00000420941 750 ntTSL 3 BASIC16.22■□□□□ 0.19
PDE6BP35913 AC006967.2-201ENST00000426169 432 ntTSL 3 BASIC16.22■□□□□ 0.19
PDE6BP35913 AL512422.2-201ENST00000426453 551 ntTSL 2 BASIC16.22■□□□□ 0.19
PDE6BP35913 AC007312.1-201ENST00000427493 258 ntBASIC16.22■□□□□ 0.19
PDE6BP35913 AC069257.3-201ENST00000431391 708 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
PDE6BP35913 AC140481.1-202ENST00000436488 525 ntTSL 2 BASIC16.22■□□□□ 0.19
PDE6BP35913 AKIRIN1P2-201ENST00000440655 570 ntBASIC16.22■□□□□ 0.19
PDE6BP35913 HNRNPA1P30-202ENST00000440699 997 ntBASIC16.22■□□□□ 0.19
PDE6BP35913 CNBP-202ENST00000441626 1040 ntTSL 2 BASIC16.22■□□□□ 0.19
PDE6BP35913 AC105446.1-201ENST00000441882 407 ntTSL 3 BASIC16.22■□□□□ 0.19
PDE6BP35913 AKR1B1P3-201ENST00000525311 588 ntBASIC16.22■□□□□ 0.19
PDE6BP35913 SSSCA1-203ENST00000526877 713 ntTSL 3 BASIC16.22■□□□□ 0.19
PDE6BP35913 SELENOK-205ENST00000541726 814 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
PDE6BP35913 AL121790.2-201ENST00000553425 379 ntTSL 4 BASIC16.22■□□□□ 0.19
PDE6BP35913 RN7SL5P-201ENST00000581458 321 ntBASIC16.22■□□□□ 0.19
PDE6BP35913 AC008894.2-202ENST00000599676 1027 ntTSL 3 BASIC16.22■□□□□ 0.19
PDE6BP35913 AC239600.1-201ENST00000603201 462 ntBASIC16.22■□□□□ 0.19
PDE6BP35913 AC010335.3-201ENST00000623767 531 ntBASIC16.22■□□□□ 0.19
PDE6BP35913 LINC00963-217ENST00000624009 663 ntTSL 5 BASIC16.22■□□□□ 0.19
PDE6BP35913 LINC01002-223ENST00000633179 407 ntTSL 5 BASIC16.22■□□□□ 0.19
PDE6BP35913 AC016526.4-201ENST00000636059 517 ntTSL 3 BASIC16.22■□□□□ 0.19
PDE6BP35913 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDE6BP35913 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDE6BP35913 DDX19B-208ENST00000563392 1760 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms