Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 ST3GAL6-202ENST00000394162 3571 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
RCL1Q9Y2P8 GRIK1-203ENST00000389125 3140 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
RCL1Q9Y2P8 ANKRD34A-201ENST00000606888 3613 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
RCL1Q9Y2P8 PIM1-201ENST00000373509 2650 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
RCL1Q9Y2P8 KRT26-201ENST00000335552 1733 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
RCL1Q9Y2P8 HPS1-201ENST00000325103 3703 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
RCL1Q9Y2P8 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
RCL1Q9Y2P8 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC10.99□□□□□ -0.65
RCL1Q9Y2P8 ZMAT5-201ENST00000344318 899 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
RCL1Q9Y2P8 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
RCL1Q9Y2P8 GGCT-205ENST00000409436 954 ntTSL 3 BASIC10.99□□□□□ -0.65
RCL1Q9Y2P8 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC10.99□□□□□ -0.65
RCL1Q9Y2P8 RPS9P1-201ENST00000419943 583 ntBASIC10.99□□□□□ -0.65
RCL1Q9Y2P8 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC10.99□□□□□ -0.65
RCL1Q9Y2P8 AC116345.2-201ENST00000512837 523 ntBASIC10.99□□□□□ -0.65
RCL1Q9Y2P8 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
RCL1Q9Y2P8 FADS2-212ENST00000522639 360 ntTSL 5 BASIC10.99□□□□□ -0.65
RCL1Q9Y2P8 TJP2-209ENST00000539225 3838 ntAPPRIS ALT2 TSL 2 BASIC10.99□□□□□ -0.65
RCL1Q9Y2P8 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
RCL1Q9Y2P8 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
RCL1Q9Y2P8 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC10.99□□□□□ -0.65
RCL1Q9Y2P8 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC10.99□□□□□ -0.65
RCL1Q9Y2P8 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC10.99□□□□□ -0.65
RCL1Q9Y2P8 FADS2-215ENST00000574708 385 ntTSL 3 BASIC10.99□□□□□ -0.65
RCL1Q9Y2P8 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC10.99□□□□□ -0.65
RCL1Q9Y2P8 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC10.99□□□□□ -0.65
RCL1Q9Y2P8 AL591926.3-201ENST00000611630 238 ntBASIC10.99□□□□□ -0.65
RCL1Q9Y2P8 RHOXF1P1-202ENST00000635473 501 ntBASIC10.99□□□□□ -0.65
RCL1Q9Y2P8 RGS3-204ENST00000350696 4387 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
RCL1Q9Y2P8 SHROOM2P1-201ENST00000434773 2384 ntBASIC10.99□□□□□ -0.65
RCL1Q9Y2P8 NANP-201ENST00000304788 3964 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
RCL1Q9Y2P8 LILRA6-203ENST00000396365 1890 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
RCL1Q9Y2P8 LINC00540-203ENST00000631321 2412 ntTSL 2 BASIC10.99□□□□□ -0.65
RCL1Q9Y2P8 TRUB2-201ENST00000372890 5719 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
RCL1Q9Y2P8 RAVER1-201ENST00000293677 3595 ntAPPRIS P2 TSL 5 BASIC10.99□□□□□ -0.65
RCL1Q9Y2P8 AC245100.6-201ENST00000427169 1918 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
RCL1Q9Y2P8 ZFR-201ENST00000265069 4738 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
RCL1Q9Y2P8 ARRDC3-AS1-201ENST00000625713 2500 ntTSL 2 BASIC10.99□□□□□ -0.65
RCL1Q9Y2P8 PSMC3IP-201ENST00000253789 1408 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
RCL1Q9Y2P8 POLA2-201ENST00000265465 3744 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
RCL1Q9Y2P8 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC10.99□□□□□ -0.65
RCL1Q9Y2P8 L1CAM-202ENST00000361981 5004 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
RCL1Q9Y2P8 AC004471.2-201ENST00000609936 1514 ntTSL 3 BASIC10.99□□□□□ -0.65
RCL1Q9Y2P8 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
RCL1Q9Y2P8 LINC01447-201ENST00000429010 2761 ntTSL 2 BASIC10.99□□□□□ -0.65
RCL1Q9Y2P8 KLK2-202ENST00000358049 2847 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
RCL1Q9Y2P8 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
RCL1Q9Y2P8 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
RCL1Q9Y2P8 ARHGEF2-203ENST00000361247 4149 ntAPPRIS P4 TSL 1 (best) BASIC10.99□□□□□ -0.65
RCL1Q9Y2P8 SNAP91-212ENST00000520302 4136 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
RCL1Q9Y2P8 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC10.98□□□□□ -0.65
RCL1Q9Y2P8 DYNC1I1-205ENST00000447467 2947 ntAPPRIS ALT1 TSL 1 (best) BASIC10.98□□□□□ -0.65
RCL1Q9Y2P8 ENO2-209ENST00000538763 1646 ntTSL 5 BASIC10.98□□□□□ -0.65
RCL1Q9Y2P8 AAGAB-207ENST00000561452 2251 ntTSL 5 BASIC10.98□□□□□ -0.65
RCL1Q9Y2P8 HNRNPL-210ENST00000600873 1633 ntTSL 5 BASIC10.98□□□□□ -0.65
RCL1Q9Y2P8 DPYSL5-207ENST00000614712 5128 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
RCL1Q9Y2P8 AC011511.5-201ENST00000589379 3219 ntBASIC10.98□□□□□ -0.65
RCL1Q9Y2P8 ARL13B-201ENST00000303097 3264 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
RCL1Q9Y2P8 MMP19-206ENST00000548629 1813 ntTSL 5 BASIC10.98□□□□□ -0.65
RCL1Q9Y2P8 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
RCL1Q9Y2P8 MAGEA11-202ENST00000355220 1864 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
RCL1Q9Y2P8 IL17REL-201ENST00000341280 3500 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
RCL1Q9Y2P8 MRO-203ENST00000428869 1966 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
RCL1Q9Y2P8 AL391845.2-201ENST00000443930 1954 ntTSL 2 BASIC10.98□□□□□ -0.65
RCL1Q9Y2P8 KIF25-AS1-202ENST00000456585 2795 ntTSL 2 BASIC10.98□□□□□ -0.65
RCL1Q9Y2P8 MKX-202ENST00000419761 3638 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
RCL1Q9Y2P8 HYLS1-202ENST00000425380 2061 ntAPPRIS P1 TSL 3 BASIC10.98□□□□□ -0.65
RCL1Q9Y2P8 MGLL-205ENST00000453507 4552 ntTSL 2 BASIC10.98□□□□□ -0.65
RCL1Q9Y2P8 GMPS-203ENST00000496455 8751 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
RCL1Q9Y2P8 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
RCL1Q9Y2P8 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
RCL1Q9Y2P8 OR8T1P-201ENST00000421347 918 ntBASIC10.98□□□□□ -0.65
RCL1Q9Y2P8 AL359979.2-201ENST00000435108 613 ntTSL 3 BASIC10.98□□□□□ -0.65
RCL1Q9Y2P8 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
RCL1Q9Y2P8 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC10.98□□□□□ -0.65
RCL1Q9Y2P8 AL365203.1-201ENST00000450890 1048 ntTSL 3 BASIC10.98□□□□□ -0.65
RCL1Q9Y2P8 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
RCL1Q9Y2P8 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC10.98□□□□□ -0.65
RCL1Q9Y2P8 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC10.98□□□□□ -0.65
RCL1Q9Y2P8 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC10.98□□□□□ -0.65
RCL1Q9Y2P8 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC10.98□□□□□ -0.65
RCL1Q9Y2P8 RN7SL204P-201ENST00000582831 262 ntBASIC10.98□□□□□ -0.65
RCL1Q9Y2P8 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC10.98□□□□□ -0.65
RCL1Q9Y2P8 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC10.98□□□□□ -0.65
RCL1Q9Y2P8 PLEKHA5-203ENST00000429027 4762 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
RCL1Q9Y2P8 RANGAP1-201ENST00000356244 3060 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
RCL1Q9Y2P8 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
RCL1Q9Y2P8 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC10.98□□□□□ -0.65
RCL1Q9Y2P8 PPCDC-201ENST00000342932 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
RCL1Q9Y2P8 FOXJ3-202ENST00000361776 5106 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
RCL1Q9Y2P8 ZMYND11-203ENST00000381591 4229 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
RCL1Q9Y2P8 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
RCL1Q9Y2P8 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
RCL1Q9Y2P8 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC10.98□□□□□ -0.65
RCL1Q9Y2P8 ELMOD3-203ENST00000409013 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
RCL1Q9Y2P8 REPS1-205ENST00000415951 2424 ntTSL 5 BASIC10.98□□□□□ -0.65
RCL1Q9Y2P8 RAN-210ENST00000541630 1475 ntTSL 2 BASIC10.98□□□□□ -0.65
RCL1Q9Y2P8 POLE-201ENST00000320574 7840 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
RCL1Q9Y2P8 SLC2A1-203ENST00000426263 3667 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
RCL1Q9Y2P8 ATP6V0D1-218ENST00000602876 1554 ntTSL 5 BASIC10.98□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms