Protein–RNA interactions for Protein: P04406

GAPDH, Glyceraldehyde-3-phosphate dehydrogenase, humanhuman

Known RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP04406 CACNG3-201ENST00000005284 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
GAPDHP04406 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
GAPDHP04406 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
GAPDHP04406 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC11.3□□□□□ -0.6
GAPDHP04406 AC010536.1-201ENST00000538868 2611 ntBASIC11.3□□□□□ -0.6
GAPDHP04406 AL356130.1-201ENST00000620188 1965 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
GAPDHP04406 AL357140.3-201ENST00000639753 1983 ntBASIC11.3□□□□□ -0.6
GAPDHP04406 FAM225A-202ENST00000453010 5625 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
GAPDHP04406 SESN2-201ENST00000253063 3453 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
GAPDHP04406 WNT5A-201ENST00000264634 6176 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
GAPDHP04406 TACC2-209ENST00000369004 3667 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
GAPDHP04406 GNB5-203ENST00000396335 2678 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
GAPDHP04406 ALDOA-213ENST00000564595 1663 ntTSL 2 BASIC11.3□□□□□ -0.6
GAPDHP04406 RNF165-202ENST00000543885 4852 ntTSL 2 BASIC11.3□□□□□ -0.6
GAPDHP04406 FRMD1-205ENST00000440994 2857 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
GAPDHP04406 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
GAPDHP04406 KIZ-208ENST00000616848 1875 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
GAPDHP04406 FAM214B-204ENST00000378566 2566 ntTSL 2 BASIC11.29□□□□□ -0.6
GAPDHP04406 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
GAPDHP04406 PRKCE-201ENST00000306156 5650 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
GAPDHP04406 AC020741.1-201ENST00000381217 2079 ntTSL 2 BASIC11.29□□□□□ -0.6
GAPDHP04406 PIGG-217ENST00000509768 3121 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
GAPDHP04406 GDPD5-204ENST00000526177 4150 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
GAPDHP04406 PPP4R3B-203ENST00000611717 5243 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
GAPDHP04406 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
GAPDHP04406 MGAT4EP-201ENST00000330493 2810 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
GAPDHP04406 SLC35B3-201ENST00000379660 2137 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
GAPDHP04406 MED15-201ENST00000263205 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
GAPDHP04406 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
GAPDHP04406 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
GAPDHP04406 ZNF747-201ENST00000252799 3936 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
GAPDHP04406 VSTM2A-201ENST00000302287 3401 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
GAPDHP04406 MFSD11-201ENST00000336509 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
GAPDHP04406 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC11.29□□□□□ -0.6
GAPDHP04406 HK3-201ENST00000292432 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
GAPDHP04406 AC092117.1-201ENST00000621230 3250 ntBASIC11.29□□□□□ -0.6
GAPDHP04406 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
GAPDHP04406 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
GAPDHP04406 OR2K2-202ENST00000374428 1038 ntBASIC11.29□□□□□ -0.6
GAPDHP04406 MIR557-201ENST00000385239 98 ntBASIC11.29□□□□□ -0.6
GAPDHP04406 MIR1307-201ENST00000408840 149 ntBASIC11.29□□□□□ -0.6
GAPDHP04406 SLC25A24P2-201ENST00000415059 510 ntBASIC11.29□□□□□ -0.6
GAPDHP04406 AC007274.2-201ENST00000421675 662 ntBASIC11.29□□□□□ -0.6
GAPDHP04406 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC11.29□□□□□ -0.6
GAPDHP04406 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC11.29□□□□□ -0.6
GAPDHP04406 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC11.29□□□□□ -0.6
GAPDHP04406 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC11.29□□□□□ -0.6
GAPDHP04406 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC11.29□□□□□ -0.6
GAPDHP04406 RN7SL788P-201ENST00000460504 316 ntBASIC11.29□□□□□ -0.6
GAPDHP04406 TSACC-208ENST00000481479 741 ntTSL 2 BASIC11.29□□□□□ -0.6
GAPDHP04406 CD81-209ENST00000492627 886 ntTSL 3 BASIC11.29□□□□□ -0.6
GAPDHP04406 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC11.29□□□□□ -0.6
GAPDHP04406 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC11.29□□□□□ -0.6
GAPDHP04406 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
GAPDHP04406 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
GAPDHP04406 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC11.29□□□□□ -0.6
GAPDHP04406 AC006453.1-201ENST00000636037 1257 ntBASIC11.29□□□□□ -0.6
GAPDHP04406 CNKSR2-207ENST00000543067 4355 ntTSL 2 BASIC11.29□□□□□ -0.6
GAPDHP04406 AC020763.3-201ENST00000625095 2904 ntBASIC11.29□□□□□ -0.6
GAPDHP04406 ST8SIA1-203ENST00000396037 9714 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
GAPDHP04406 MIS12-202ENST00000573759 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
GAPDHP04406 MESD-201ENST00000261758 4264 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
GAPDHP04406 RBMS1-201ENST00000348849 4273 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
GAPDHP04406 RNF219-AS1-209ENST00000606429 2418 ntTSL 2 BASIC11.29□□□□□ -0.6
GAPDHP04406 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC11.29□□□□□ -0.6
GAPDHP04406 PAX2-203ENST00000370296 4140 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
GAPDHP04406 PAX2-205ENST00000428433 4126 ntTSL 5 BASIC11.29□□□□□ -0.6
GAPDHP04406 MME-204ENST00000462745 3590 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
GAPDHP04406 EDARADD-204ENST00000637660 2803 ntTSL 5 BASIC11.29□□□□□ -0.6
GAPDHP04406 ATXN2L-201ENST00000325215 3788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
GAPDHP04406 CCDC163-203ENST00000626657 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
GAPDHP04406 NR4A1-201ENST00000243050 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
GAPDHP04406 BOLL-201ENST00000282278 2742 ntTSL 2 BASIC11.29□□□□□ -0.6
GAPDHP04406 SLC26A6-203ENST00000358747 2729 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
GAPDHP04406 KCNIP3-201ENST00000295225 2940 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
GAPDHP04406 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC11.28□□□□□ -0.6
GAPDHP04406 CUL2-210ENST00000626172 4115 ntTSL 5 BASIC11.28□□□□□ -0.6
GAPDHP04406 NRADDP-202ENST00000641269 1585 ntBASIC11.28□□□□□ -0.6
GAPDHP04406 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC11.28□□□□□ -0.6
GAPDHP04406 GOLGA8O-201ENST00000509311 1997 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
GAPDHP04406 AOC2-202ENST00000452774 2572 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
GAPDHP04406 NEK11-209ENST00000510688 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
GAPDHP04406 PNPLA8-208ENST00000453144 3366 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
GAPDHP04406 NOS3-201ENST00000297494 4388 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
GAPDHP04406 TNK2-208ENST00000428187 4235 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
GAPDHP04406 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
GAPDHP04406 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC11.28□□□□□ -0.6
GAPDHP04406 LINC01106-201ENST00000436665 2244 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
GAPDHP04406 EVA1A-201ENST00000233712 1815 ntAPPRIS P2 TSL 2 BASIC11.28□□□□□ -0.6
GAPDHP04406 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC11.28□□□□□ -0.6
GAPDHP04406 PAPLN-203ENST00000554301 4090 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
GAPDHP04406 LINC02228-202ENST00000641261 2489 ntBASIC11.28□□□□□ -0.6
GAPDHP04406 CACNA1F-202ENST00000376251 5813 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
GAPDHP04406 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
GAPDHP04406 GLP1R-201ENST00000373256 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
GAPDHP04406 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC11.28□□□□□ -0.6
GAPDHP04406 DIDO1-202ENST00000354665 2707 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
GAPDHP04406 SEC13-203ENST00000383801 1479 ntTSL 2 BASIC11.28□□□□□ -0.6
GAPDHP04406 SCRN1-207ENST00000434476 1454 ntTSL 2 BASIC11.28□□□□□ -0.6
GAPDHP04406 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms