Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 AC080038.3-201ENST00000623346 1952 ntBASIC19.7■□□□□ 0.74
COPS3Q9UNS2 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.7■□□□□ 0.74
COPS3Q9UNS2 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.7■□□□□ 0.74
COPS3Q9UNS2 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
COPS3Q9UNS2 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
COPS3Q9UNS2 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COPS3Q9UNS2 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COPS3Q9UNS2 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COPS3Q9UNS2 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.69■□□□□ 0.74
COPS3Q9UNS2 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COPS3Q9UNS2 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.69■□□□□ 0.74
COPS3Q9UNS2 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COPS3Q9UNS2 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
COPS3Q9UNS2 AC144652.1-201ENST00000609974 1624 ntBASIC19.69■□□□□ 0.74
COPS3Q9UNS2 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COPS3Q9UNS2 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
COPS3Q9UNS2 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
COPS3Q9UNS2 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
COPS3Q9UNS2 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
COPS3Q9UNS2 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
COPS3Q9UNS2 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
COPS3Q9UNS2 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.68■□□□□ 0.74
COPS3Q9UNS2 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COPS3Q9UNS2 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC19.68■□□□□ 0.74
COPS3Q9UNS2 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC19.68■□□□□ 0.74
COPS3Q9UNS2 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
COPS3Q9UNS2 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
COPS3Q9UNS2 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
COPS3Q9UNS2 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
COPS3Q9UNS2 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COPS3Q9UNS2 AC007375.3-201ENST00000600936 2314 ntBASIC19.68■□□□□ 0.74
COPS3Q9UNS2 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
COPS3Q9UNS2 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COPS3Q9UNS2 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.67■□□□□ 0.74
COPS3Q9UNS2 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
COPS3Q9UNS2 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
COPS3Q9UNS2 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
COPS3Q9UNS2 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
COPS3Q9UNS2 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COPS3Q9UNS2 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
COPS3Q9UNS2 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.67■□□□□ 0.74
COPS3Q9UNS2 AC087742.1-201ENST00000575880 1738 ntBASIC19.67■□□□□ 0.74
COPS3Q9UNS2 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
COPS3Q9UNS2 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COPS3Q9UNS2 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
COPS3Q9UNS2 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COPS3Q9UNS2 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COPS3Q9UNS2 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COPS3Q9UNS2 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
COPS3Q9UNS2 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COPS3Q9UNS2 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
COPS3Q9UNS2 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
COPS3Q9UNS2 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
COPS3Q9UNS2 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
COPS3Q9UNS2 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.66■□□□□ 0.74
COPS3Q9UNS2 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.66■□□□□ 0.74
COPS3Q9UNS2 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
COPS3Q9UNS2 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.66■□□□□ 0.74
COPS3Q9UNS2 SENP5-202ENST00000419026 973 ntTSL 3 BASIC19.66■□□□□ 0.74
COPS3Q9UNS2 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC19.66■□□□□ 0.74
COPS3Q9UNS2 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
COPS3Q9UNS2 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.66■□□□□ 0.74
COPS3Q9UNS2 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COPS3Q9UNS2 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.66■□□□□ 0.74
COPS3Q9UNS2 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
COPS3Q9UNS2 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
COPS3Q9UNS2 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
COPS3Q9UNS2 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
COPS3Q9UNS2 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COPS3Q9UNS2 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COPS3Q9UNS2 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COPS3Q9UNS2 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.65■□□□□ 0.74
COPS3Q9UNS2 AC103724.3-201ENST00000564481 992 ntBASIC19.65■□□□□ 0.74
COPS3Q9UNS2 AL033527.3-201ENST00000566366 1196 ntBASIC19.65■□□□□ 0.74
COPS3Q9UNS2 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC19.65■□□□□ 0.74
COPS3Q9UNS2 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
COPS3Q9UNS2 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COPS3Q9UNS2 KRT8P33-201ENST00000508125 1423 ntBASIC19.65■□□□□ 0.74
COPS3Q9UNS2 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COPS3Q9UNS2 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COPS3Q9UNS2 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
COPS3Q9UNS2 AC092053.2-201ENST00000640557 1818 ntBASIC19.65■□□□□ 0.74
COPS3Q9UNS2 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
COPS3Q9UNS2 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.64■□□□□ 0.74
COPS3Q9UNS2 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC19.64■□□□□ 0.73
COPS3Q9UNS2 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC19.64■□□□□ 0.73
COPS3Q9UNS2 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COPS3Q9UNS2 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.64■□□□□ 0.73
COPS3Q9UNS2 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.64■□□□□ 0.73
COPS3Q9UNS2 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
COPS3Q9UNS2 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
COPS3Q9UNS2 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COPS3Q9UNS2 SLC25A24-204ENST00000569674 2357 ntBASIC19.63■□□□□ 0.73
COPS3Q9UNS2 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.63■□□□□ 0.73
COPS3Q9UNS2 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
COPS3Q9UNS2 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.63■□□□□ 0.73
COPS3Q9UNS2 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
COPS3Q9UNS2 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COPS3Q9UNS2 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.63■□□□□ 0.73
COPS3Q9UNS2 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms