Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
LRIT1Q9P2V4 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LRIT1Q9P2V4 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.48■■□□□ 1.03
LRIT1Q9P2V4 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
LRIT1Q9P2V4 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
LRIT1Q9P2V4 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.48■■□□□ 1.03
LRIT1Q9P2V4 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.48■■□□□ 1.03
LRIT1Q9P2V4 LHPP-203ENST00000392757 840 ntTSL 3 BASIC21.48■■□□□ 1.03
LRIT1Q9P2V4 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.48■■□□□ 1.03
LRIT1Q9P2V4 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
LRIT1Q9P2V4 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
LRIT1Q9P2V4 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.48■■□□□ 1.03
LRIT1Q9P2V4 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
LRIT1Q9P2V4 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LRIT1Q9P2V4 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
LRIT1Q9P2V4 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.47■■□□□ 1.03
LRIT1Q9P2V4 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
LRIT1Q9P2V4 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LRIT1Q9P2V4 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.47■■□□□ 1.03
LRIT1Q9P2V4 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC21.47■■□□□ 1.03
LRIT1Q9P2V4 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.47■■□□□ 1.03
LRIT1Q9P2V4 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
LRIT1Q9P2V4 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LRIT1Q9P2V4 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LRIT1Q9P2V4 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LRIT1Q9P2V4 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
LRIT1Q9P2V4 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
LRIT1Q9P2V4 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
LRIT1Q9P2V4 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.46■■□□□ 1.03
LRIT1Q9P2V4 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
LRIT1Q9P2V4 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
LRIT1Q9P2V4 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.46■■□□□ 1.03
LRIT1Q9P2V4 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
LRIT1Q9P2V4 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
LRIT1Q9P2V4 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.46■■□□□ 1.03
LRIT1Q9P2V4 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
LRIT1Q9P2V4 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
LRIT1Q9P2V4 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
LRIT1Q9P2V4 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
LRIT1Q9P2V4 ABCB10P4-201ENST00000566803 2184 ntBASIC21.46■■□□□ 1.03
LRIT1Q9P2V4 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21.45■■□□□ 1.03
LRIT1Q9P2V4 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.45■■□□□ 1.02
LRIT1Q9P2V4 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
LRIT1Q9P2V4 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
LRIT1Q9P2V4 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC21.45■■□□□ 1.02
LRIT1Q9P2V4 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.45■■□□□ 1.02
LRIT1Q9P2V4 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
LRIT1Q9P2V4 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
LRIT1Q9P2V4 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.45■■□□□ 1.02
LRIT1Q9P2V4 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
LRIT1Q9P2V4 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
LRIT1Q9P2V4 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
LRIT1Q9P2V4 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.44■■□□□ 1.02
LRIT1Q9P2V4 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
LRIT1Q9P2V4 KRT18P5-201ENST00000436075 1291 ntBASIC21.44■■□□□ 1.02
LRIT1Q9P2V4 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.44■■□□□ 1.02
LRIT1Q9P2V4 DUX4L2-201ENST00000561772 1275 ntBASIC21.44■■□□□ 1.02
LRIT1Q9P2V4 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.44■■□□□ 1.02
LRIT1Q9P2V4 DUX4L6-201ENST00000626483 1275 ntBASIC21.44■■□□□ 1.02
LRIT1Q9P2V4 DUX4L1-201ENST00000627662 1275 ntBASIC21.44■■□□□ 1.02
LRIT1Q9P2V4 DUX4L8-201ENST00000629013 1275 ntBASIC21.44■■□□□ 1.02
LRIT1Q9P2V4 DUX4L3-201ENST00000630187 1275 ntBASIC21.44■■□□□ 1.02
LRIT1Q9P2V4 DUX4L7-201ENST00000630678 1275 ntBASIC21.44■■□□□ 1.02
LRIT1Q9P2V4 DUX4L5-201ENST00000630834 1275 ntBASIC21.44■■□□□ 1.02
LRIT1Q9P2V4 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.44■■□□□ 1.02
LRIT1Q9P2V4 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
LRIT1Q9P2V4 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
LRIT1Q9P2V4 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.44■■□□□ 1.02
LRIT1Q9P2V4 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
LRIT1Q9P2V4 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
LRIT1Q9P2V4 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
LRIT1Q9P2V4 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
LRIT1Q9P2V4 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
LRIT1Q9P2V4 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
LRIT1Q9P2V4 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.43■■□□□ 1.02
LRIT1Q9P2V4 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
LRIT1Q9P2V4 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC21.43■■□□□ 1.02
LRIT1Q9P2V4 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
LRIT1Q9P2V4 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
LRIT1Q9P2V4 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
LRIT1Q9P2V4 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
LRIT1Q9P2V4 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.43■■□□□ 1.02
LRIT1Q9P2V4 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.42■■□□□ 1.02
LRIT1Q9P2V4 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
LRIT1Q9P2V4 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
LRIT1Q9P2V4 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
LRIT1Q9P2V4 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21.42■■□□□ 1.02
LRIT1Q9P2V4 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
LRIT1Q9P2V4 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
LRIT1Q9P2V4 AC004687.1-201ENST00000579003 1625 ntBASIC21.42■■□□□ 1.02
LRIT1Q9P2V4 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
LRIT1Q9P2V4 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
LRIT1Q9P2V4 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21.42■■□□□ 1.02
LRIT1Q9P2V4 AC105233.4-201ENST00000642045 216 ntBASIC21.42■■□□□ 1.02
LRIT1Q9P2V4 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
LRIT1Q9P2V4 AL353803.4-201ENST00000565882 1934 ntBASIC21.41■■□□□ 1.02
LRIT1Q9P2V4 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
LRIT1Q9P2V4 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
LRIT1Q9P2V4 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
LRIT1Q9P2V4 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.41■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms