Protein–RNA interactions for Protein: Q9H6T3

RPAP3, RNA polymerase II-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3Q9H6T3 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
RPAP3Q9H6T3 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
RPAP3Q9H6T3 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
RPAP3Q9H6T3 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
RPAP3Q9H6T3 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC25.74■■□□□ 1.71
RPAP3Q9H6T3 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
RPAP3Q9H6T3 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC25.74■■□□□ 1.71
RPAP3Q9H6T3 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC25.74■■□□□ 1.71
RPAP3Q9H6T3 NT5C3AP1-201ENST00000394500 1012 ntBASIC25.74■■□□□ 1.71
RPAP3Q9H6T3 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC25.74■■□□□ 1.71
RPAP3Q9H6T3 AC090192.1-201ENST00000517740 490 ntBASIC25.74■■□□□ 1.71
RPAP3Q9H6T3 TERF1P2-201ENST00000583350 1212 ntBASIC25.74■■□□□ 1.71
RPAP3Q9H6T3 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC25.74■■□□□ 1.71
RPAP3Q9H6T3 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
RPAP3Q9H6T3 AC105233.4-201ENST00000642045 216 ntBASIC25.74■■□□□ 1.71
RPAP3Q9H6T3 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC25.74■■□□□ 1.71
RPAP3Q9H6T3 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC25.74■■□□□ 1.71
RPAP3Q9H6T3 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
RPAP3Q9H6T3 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
RPAP3Q9H6T3 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC25.73■■□□□ 1.71
RPAP3Q9H6T3 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC25.73■■□□□ 1.71
RPAP3Q9H6T3 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC25.73■■□□□ 1.71
RPAP3Q9H6T3 MPST-204ENST00000404393 1329 ntTSL 5 BASIC25.73■■□□□ 1.71
RPAP3Q9H6T3 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
RPAP3Q9H6T3 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC25.73■■□□□ 1.71
RPAP3Q9H6T3 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC25.73■■□□□ 1.71
RPAP3Q9H6T3 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC25.73■■□□□ 1.71
RPAP3Q9H6T3 AC004812.2-201ENST00000611079 2094 ntBASIC25.73■■□□□ 1.71
RPAP3Q9H6T3 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC25.72■■□□□ 1.71
RPAP3Q9H6T3 AC079630.1-202ENST00000618127 1840 ntBASIC25.72■■□□□ 1.71
RPAP3Q9H6T3 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC25.72■■□□□ 1.71
RPAP3Q9H6T3 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
RPAP3Q9H6T3 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC25.72■■□□□ 1.71
RPAP3Q9H6T3 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC25.72■■□□□ 1.71
RPAP3Q9H6T3 NTF6G-201ENST00000591094 616 ntBASIC25.72■■□□□ 1.71
RPAP3Q9H6T3 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC25.72■■□□□ 1.71
RPAP3Q9H6T3 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC25.72■■□□□ 1.71
RPAP3Q9H6T3 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC25.72■■□□□ 1.71
RPAP3Q9H6T3 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
RPAP3Q9H6T3 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
RPAP3Q9H6T3 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
RPAP3Q9H6T3 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
RPAP3Q9H6T3 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC25.71■■□□□ 1.71
RPAP3Q9H6T3 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC25.71■■□□□ 1.71
RPAP3Q9H6T3 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
RPAP3Q9H6T3 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC25.71■■□□□ 1.71
RPAP3Q9H6T3 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC25.71■■□□□ 1.71
RPAP3Q9H6T3 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
RPAP3Q9H6T3 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
RPAP3Q9H6T3 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC25.7■■□□□ 1.7
RPAP3Q9H6T3 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC25.7■■□□□ 1.7
RPAP3Q9H6T3 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC25.7■■□□□ 1.7
RPAP3Q9H6T3 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC25.7■■□□□ 1.7
RPAP3Q9H6T3 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC25.7■■□□□ 1.7
RPAP3Q9H6T3 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
RPAP3Q9H6T3 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC25.7■■□□□ 1.7
RPAP3Q9H6T3 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC25.7■■□□□ 1.7
RPAP3Q9H6T3 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC25.7■■□□□ 1.7
RPAP3Q9H6T3 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC25.69■■□□□ 1.7
RPAP3Q9H6T3 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
RPAP3Q9H6T3 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC25.69■■□□□ 1.7
RPAP3Q9H6T3 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC25.69■■□□□ 1.7
RPAP3Q9H6T3 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC25.69■■□□□ 1.7
RPAP3Q9H6T3 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
RPAP3Q9H6T3 GXYLT1P2-201ENST00000433312 1230 ntBASIC25.69■■□□□ 1.7
RPAP3Q9H6T3 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
RPAP3Q9H6T3 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
RPAP3Q9H6T3 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC25.69■■□□□ 1.7
RPAP3Q9H6T3 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
RPAP3Q9H6T3 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC25.69■■□□□ 1.7
RPAP3Q9H6T3 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
RPAP3Q9H6T3 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
RPAP3Q9H6T3 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC25.68■■□□□ 1.7
RPAP3Q9H6T3 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC25.68■■□□□ 1.7
RPAP3Q9H6T3 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC25.68■■□□□ 1.7
RPAP3Q9H6T3 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC25.68■■□□□ 1.7
RPAP3Q9H6T3 RARA-203ENST00000394086 2008 ntTSL 2 BASIC25.68■■□□□ 1.7
RPAP3Q9H6T3 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
RPAP3Q9H6T3 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
RPAP3Q9H6T3 AC004687.1-201ENST00000579003 1625 ntBASIC25.67■■□□□ 1.7
RPAP3Q9H6T3 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
RPAP3Q9H6T3 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
RPAP3Q9H6T3 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
RPAP3Q9H6T3 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC25.67■■□□□ 1.7
RPAP3Q9H6T3 AC004911.1-201ENST00000416316 871 ntBASIC25.67■■□□□ 1.7
RPAP3Q9H6T3 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC25.67■■□□□ 1.7
RPAP3Q9H6T3 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC25.67■■□□□ 1.7
RPAP3Q9H6T3 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
RPAP3Q9H6T3 AL139125.2-201ENST00000623134 1869 ntBASIC25.67■■□□□ 1.7
RPAP3Q9H6T3 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC25.67■■□□□ 1.7
RPAP3Q9H6T3 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC25.67■■□□□ 1.7
RPAP3Q9H6T3 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
RPAP3Q9H6T3 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
RPAP3Q9H6T3 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
RPAP3Q9H6T3 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC25.66■■□□□ 1.7
RPAP3Q9H6T3 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC25.66■■□□□ 1.7
RPAP3Q9H6T3 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
RPAP3Q9H6T3 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC25.66■■□□□ 1.7
RPAP3Q9H6T3 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC25.66■■□□□ 1.7
RPAP3Q9H6T3 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC25.66■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms