Protein–RNA interactions for Protein: Q96RK1

CITED4, Cbp/p300-interacting transactivator 4, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CITED4Q96RK1 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.82■□□□□ 0.6
CITED4Q96RK1 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CITED4Q96RK1 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CITED4Q96RK1 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.82■□□□□ 0.6
CITED4Q96RK1 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
CITED4Q96RK1 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CITED4Q96RK1 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
CITED4Q96RK1 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
CITED4Q96RK1 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CITED4Q96RK1 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CITED4Q96RK1 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.8■□□□□ 0.6
CITED4Q96RK1 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CITED4Q96RK1 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.8■□□□□ 0.6
CITED4Q96RK1 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CITED4Q96RK1 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CITED4Q96RK1 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.8■□□□□ 0.6
CITED4Q96RK1 CEP120-209ENST00000515110 606 ntTSL 3 BASIC18.8■□□□□ 0.6
CITED4Q96RK1 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CITED4Q96RK1 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CITED4Q96RK1 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CITED4Q96RK1 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CITED4Q96RK1 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.8■□□□□ 0.6
CITED4Q96RK1 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CITED4Q96RK1 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CITED4Q96RK1 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CITED4Q96RK1 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CITED4Q96RK1 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CITED4Q96RK1 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CITED4Q96RK1 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CITED4Q96RK1 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC18.79■□□□□ 0.6
CITED4Q96RK1 AC008813.1-201ENST00000536597 885 ntBASIC18.79■□□□□ 0.6
CITED4Q96RK1 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC18.79■□□□□ 0.6
CITED4Q96RK1 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC18.79■□□□□ 0.6
CITED4Q96RK1 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CITED4Q96RK1 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CITED4Q96RK1 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.78■□□□□ 0.6
CITED4Q96RK1 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CITED4Q96RK1 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CITED4Q96RK1 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CITED4Q96RK1 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
CITED4Q96RK1 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CITED4Q96RK1 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CITED4Q96RK1 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CITED4Q96RK1 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC18.78■□□□□ 0.6
CITED4Q96RK1 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CITED4Q96RK1 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CITED4Q96RK1 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
CITED4Q96RK1 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CITED4Q96RK1 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CITED4Q96RK1 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
CITED4Q96RK1 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CITED4Q96RK1 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CITED4Q96RK1 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
CITED4Q96RK1 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
CITED4Q96RK1 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CITED4Q96RK1 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CITED4Q96RK1 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CITED4Q96RK1 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CITED4Q96RK1 RPS2-210ENST00000530225 765 ntTSL 2 BASIC18.76■□□□□ 0.59
CITED4Q96RK1 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CITED4Q96RK1 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CITED4Q96RK1 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
CITED4Q96RK1 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.76■□□□□ 0.59
CITED4Q96RK1 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CITED4Q96RK1 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CITED4Q96RK1 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CITED4Q96RK1 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CITED4Q96RK1 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CITED4Q96RK1 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CITED4Q96RK1 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CITED4Q96RK1 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CITED4Q96RK1 HES4-202ENST00000428771 1040 ntTSL 2 BASIC18.75■□□□□ 0.59
CITED4Q96RK1 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CITED4Q96RK1 CHST11-203ENST00000547956 936 ntTSL 2 BASIC18.75■□□□□ 0.59
CITED4Q96RK1 NTF6A-201ENST00000591175 560 ntBASIC18.75■□□□□ 0.59
CITED4Q96RK1 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CITED4Q96RK1 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
CITED4Q96RK1 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CITED4Q96RK1 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CITED4Q96RK1 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.75■□□□□ 0.59
CITED4Q96RK1 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
CITED4Q96RK1 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CITED4Q96RK1 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CITED4Q96RK1 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
CITED4Q96RK1 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.75■□□□□ 0.59
CITED4Q96RK1 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
CITED4Q96RK1 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.74■□□□□ 0.59
CITED4Q96RK1 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CITED4Q96RK1 AL157384.1-201ENST00000445995 2473 ntBASIC18.74■□□□□ 0.59
CITED4Q96RK1 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CITED4Q96RK1 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
CITED4Q96RK1 AC012354.3-201ENST00000623734 483 ntBASIC18.74■□□□□ 0.59
CITED4Q96RK1 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
CITED4Q96RK1 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC18.74■□□□□ 0.59
CITED4Q96RK1 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CITED4Q96RK1 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CITED4Q96RK1 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CITED4Q96RK1 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
CITED4Q96RK1 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CITED4Q96RK1 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms