Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC27.52■■■□□ 2
RTL9Q8NET4 LHPP-203ENST00000392757 840 ntTSL 3 BASIC27.52■■■□□ 2
RTL9Q8NET4 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC27.52■■■□□ 2
RTL9Q8NET4 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC27.52■■■□□ 2
RTL9Q8NET4 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC27.52■■■□□ 2
RTL9Q8NET4 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC27.51■■■□□ 2
RTL9Q8NET4 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC27.51■■■□□ 2
RTL9Q8NET4 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC27.51■■□□□ 1.99
RTL9Q8NET4 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
RTL9Q8NET4 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
RTL9Q8NET4 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC27.51■■□□□ 1.99
RTL9Q8NET4 MIR6084-201ENST00000622012 110 ntBASIC27.51■■□□□ 1.99
RTL9Q8NET4 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
RTL9Q8NET4 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
RTL9Q8NET4 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
RTL9Q8NET4 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC27.51■■□□□ 1.99
RTL9Q8NET4 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC27.51■■□□□ 1.99
RTL9Q8NET4 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
RTL9Q8NET4 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
RTL9Q8NET4 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC27.5■■□□□ 1.99
RTL9Q8NET4 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC27.5■■□□□ 1.99
RTL9Q8NET4 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC27.5■■□□□ 1.99
RTL9Q8NET4 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
RTL9Q8NET4 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC27.5■■□□□ 1.99
RTL9Q8NET4 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
RTL9Q8NET4 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
RTL9Q8NET4 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC27.5■■□□□ 1.99
RTL9Q8NET4 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC27.5■■□□□ 1.99
RTL9Q8NET4 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC27.5■■□□□ 1.99
RTL9Q8NET4 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC27.5■■□□□ 1.99
RTL9Q8NET4 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
RTL9Q8NET4 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC27.49■■□□□ 1.99
RTL9Q8NET4 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC27.49■■□□□ 1.99
RTL9Q8NET4 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC27.49■■□□□ 1.99
RTL9Q8NET4 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
RTL9Q8NET4 AL137784.2-201ENST00000607332 1000 ntBASIC27.49■■□□□ 1.99
RTL9Q8NET4 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
RTL9Q8NET4 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
RTL9Q8NET4 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC27.49■■□□□ 1.99
RTL9Q8NET4 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC27.49■■□□□ 1.99
RTL9Q8NET4 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
RTL9Q8NET4 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
RTL9Q8NET4 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC27.48■■□□□ 1.99
RTL9Q8NET4 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC27.48■■□□□ 1.99
RTL9Q8NET4 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
RTL9Q8NET4 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC27.48■■□□□ 1.99
RTL9Q8NET4 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC27.48■■□□□ 1.99
RTL9Q8NET4 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC27.47■■□□□ 1.99
RTL9Q8NET4 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC27.47■■□□□ 1.99
RTL9Q8NET4 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
RTL9Q8NET4 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC27.47■■□□□ 1.99
RTL9Q8NET4 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC27.47■■□□□ 1.99
RTL9Q8NET4 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC27.47■■□□□ 1.99
RTL9Q8NET4 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC27.47■■□□□ 1.99
RTL9Q8NET4 PREB-202ENST00000406567 1910 ntTSL 5 BASIC27.47■■□□□ 1.99
RTL9Q8NET4 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC27.46■■□□□ 1.99
RTL9Q8NET4 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
RTL9Q8NET4 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC27.46■■□□□ 1.99
RTL9Q8NET4 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC27.46■■□□□ 1.99
RTL9Q8NET4 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
RTL9Q8NET4 H19-210ENST00000439725 1929 ntTSL 2 BASIC27.46■■□□□ 1.99
RTL9Q8NET4 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
RTL9Q8NET4 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC27.46■■□□□ 1.99
RTL9Q8NET4 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
RTL9Q8NET4 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC27.46■■□□□ 1.99
RTL9Q8NET4 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC27.46■■□□□ 1.99
RTL9Q8NET4 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC27.46■■□□□ 1.99
RTL9Q8NET4 TERF1P2-201ENST00000583350 1212 ntBASIC27.46■■□□□ 1.99
RTL9Q8NET4 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
RTL9Q8NET4 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
RTL9Q8NET4 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC27.45■■□□□ 1.99
RTL9Q8NET4 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
RTL9Q8NET4 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC27.45■■□□□ 1.99
RTL9Q8NET4 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC27.45■■□□□ 1.98
RTL9Q8NET4 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
RTL9Q8NET4 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
RTL9Q8NET4 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC27.45■■□□□ 1.98
RTL9Q8NET4 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC27.45■■□□□ 1.98
RTL9Q8NET4 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC27.45■■□□□ 1.98
RTL9Q8NET4 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC27.44■■□□□ 1.98
RTL9Q8NET4 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC27.44■■□□□ 1.98
RTL9Q8NET4 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC27.44■■□□□ 1.98
RTL9Q8NET4 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC27.44■■□□□ 1.98
RTL9Q8NET4 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
RTL9Q8NET4 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC27.44■■□□□ 1.98
RTL9Q8NET4 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC27.44■■□□□ 1.98
RTL9Q8NET4 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC27.44■■□□□ 1.98
RTL9Q8NET4 CCDC92B-201ENST00000575506 885 ntBASIC27.44■■□□□ 1.98
RTL9Q8NET4 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC27.44■■□□□ 1.98
RTL9Q8NET4 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
RTL9Q8NET4 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
RTL9Q8NET4 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC27.44■■□□□ 1.98
RTL9Q8NET4 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC27.44■■□□□ 1.98
RTL9Q8NET4 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC27.43■■□□□ 1.98
RTL9Q8NET4 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC27.43■■□□□ 1.98
RTL9Q8NET4 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
RTL9Q8NET4 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC27.43■■□□□ 1.98
RTL9Q8NET4 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC27.42■■□□□ 1.98
RTL9Q8NET4 MPST-204ENST00000404393 1329 ntTSL 5 BASIC27.42■■□□□ 1.98
RTL9Q8NET4 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms