Protein–RNA interactions for Protein: Q8NEM2

SHCBP1, SHC SH2 domain-binding protein 1, humanhuman

Predictions only

Length 672 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1Q8NEM2 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
SHCBP1Q8NEM2 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
SHCBP1Q8NEM2 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
SHCBP1Q8NEM2 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC25.39■■□□□ 1.66
SHCBP1Q8NEM2 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
SHCBP1Q8NEM2 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC25.39■■□□□ 1.65
SHCBP1Q8NEM2 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
SHCBP1Q8NEM2 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC25.38■■□□□ 1.65
SHCBP1Q8NEM2 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC25.38■■□□□ 1.65
SHCBP1Q8NEM2 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
SHCBP1Q8NEM2 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
SHCBP1Q8NEM2 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
SHCBP1Q8NEM2 TPRG1LP1-201ENST00000598702 760 ntBASIC25.38■■□□□ 1.65
SHCBP1Q8NEM2 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC25.38■■□□□ 1.65
SHCBP1Q8NEM2 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC25.38■■□□□ 1.65
SHCBP1Q8NEM2 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
SHCBP1Q8NEM2 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
SHCBP1Q8NEM2 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
SHCBP1Q8NEM2 CREM-210ENST00000374721 2020 ntTSL 5 BASIC25.37■■□□□ 1.65
SHCBP1Q8NEM2 RARA-203ENST00000394086 2008 ntTSL 2 BASIC25.37■■□□□ 1.65
SHCBP1Q8NEM2 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
SHCBP1Q8NEM2 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
SHCBP1Q8NEM2 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
SHCBP1Q8NEM2 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC25.37■■□□□ 1.65
SHCBP1Q8NEM2 ID1-201ENST00000376105 1233 ntBASIC25.37■■□□□ 1.65
SHCBP1Q8NEM2 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC25.37■■□□□ 1.65
SHCBP1Q8NEM2 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC25.37■■□□□ 1.65
SHCBP1Q8NEM2 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC25.37■■□□□ 1.65
SHCBP1Q8NEM2 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC25.37■■□□□ 1.65
SHCBP1Q8NEM2 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
SHCBP1Q8NEM2 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
SHCBP1Q8NEM2 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC25.36■■□□□ 1.65
SHCBP1Q8NEM2 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
SHCBP1Q8NEM2 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC25.36■■□□□ 1.65
SHCBP1Q8NEM2 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
SHCBP1Q8NEM2 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
SHCBP1Q8NEM2 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC25.36■■□□□ 1.65
SHCBP1Q8NEM2 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC25.36■■□□□ 1.65
SHCBP1Q8NEM2 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC25.36■■□□□ 1.65
SHCBP1Q8NEM2 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC25.36■■□□□ 1.65
SHCBP1Q8NEM2 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC25.36■■□□□ 1.65
SHCBP1Q8NEM2 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
SHCBP1Q8NEM2 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC25.36■■□□□ 1.65
SHCBP1Q8NEM2 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC25.36■■□□□ 1.65
SHCBP1Q8NEM2 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC25.35■■□□□ 1.65
SHCBP1Q8NEM2 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SHCBP1Q8NEM2 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SHCBP1Q8NEM2 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SHCBP1Q8NEM2 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC25.35■■□□□ 1.65
SHCBP1Q8NEM2 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC25.35■■□□□ 1.65
SHCBP1Q8NEM2 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC25.35■■□□□ 1.65
SHCBP1Q8NEM2 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
SHCBP1Q8NEM2 AC068587.7-201ENST00000641602 218 ntBASIC25.35■■□□□ 1.65
SHCBP1Q8NEM2 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC25.35■■□□□ 1.65
SHCBP1Q8NEM2 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SHCBP1Q8NEM2 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC25.35■■□□□ 1.65
SHCBP1Q8NEM2 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC25.34■■□□□ 1.65
SHCBP1Q8NEM2 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC25.34■■□□□ 1.65
SHCBP1Q8NEM2 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
SHCBP1Q8NEM2 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC25.34■■□□□ 1.65
SHCBP1Q8NEM2 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC25.34■■□□□ 1.65
SHCBP1Q8NEM2 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
SHCBP1Q8NEM2 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC25.34■■□□□ 1.65
SHCBP1Q8NEM2 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC25.34■■□□□ 1.65
SHCBP1Q8NEM2 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC25.34■■□□□ 1.65
SHCBP1Q8NEM2 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
SHCBP1Q8NEM2 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
SHCBP1Q8NEM2 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
SHCBP1Q8NEM2 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
SHCBP1Q8NEM2 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
SHCBP1Q8NEM2 KRT18P61-201ENST00000585825 1298 ntBASIC25.33■■□□□ 1.65
SHCBP1Q8NEM2 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC25.33■■□□□ 1.65
SHCBP1Q8NEM2 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
SHCBP1Q8NEM2 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
SHCBP1Q8NEM2 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
SHCBP1Q8NEM2 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC25.32■■□□□ 1.64
SHCBP1Q8NEM2 AC006015.1-201ENST00000429970 570 ntBASIC25.32■■□□□ 1.64
SHCBP1Q8NEM2 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC25.32■■□□□ 1.64
SHCBP1Q8NEM2 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC25.32■■□□□ 1.64
SHCBP1Q8NEM2 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
SHCBP1Q8NEM2 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
SHCBP1Q8NEM2 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
SHCBP1Q8NEM2 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC25.31■■□□□ 1.64
SHCBP1Q8NEM2 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
SHCBP1Q8NEM2 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
SHCBP1Q8NEM2 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
SHCBP1Q8NEM2 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
SHCBP1Q8NEM2 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
SHCBP1Q8NEM2 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
SHCBP1Q8NEM2 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
SHCBP1Q8NEM2 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC25.3■■□□□ 1.64
SHCBP1Q8NEM2 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC25.3■■□□□ 1.64
SHCBP1Q8NEM2 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
SHCBP1Q8NEM2 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
SHCBP1Q8NEM2 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
SHCBP1Q8NEM2 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
SHCBP1Q8NEM2 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
SHCBP1Q8NEM2 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
SHCBP1Q8NEM2 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC25.29■■□□□ 1.64
SHCBP1Q8NEM2 GALNS-213ENST00000569433 723 ntTSL 3 BASIC25.29■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms