Protein–RNA interactions for Protein: Q86YD5

LDLRAD3, Low-density lipoprotein receptor class A domain-containing protein 3, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3Q86YD5 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
LDLRAD3Q86YD5 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LDLRAD3Q86YD5 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LDLRAD3Q86YD5 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
LDLRAD3Q86YD5 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
LDLRAD3Q86YD5 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC18.78■□□□□ 0.6
LDLRAD3Q86YD5 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC18.78■□□□□ 0.6
LDLRAD3Q86YD5 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
LDLRAD3Q86YD5 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LDLRAD3Q86YD5 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LDLRAD3Q86YD5 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LDLRAD3Q86YD5 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
LDLRAD3Q86YD5 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
LDLRAD3Q86YD5 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC18.78■□□□□ 0.6
LDLRAD3Q86YD5 EI24-204ENST00000527235 1625 ntTSL 5 BASIC18.78■□□□□ 0.6
LDLRAD3Q86YD5 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LDLRAD3Q86YD5 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LDLRAD3Q86YD5 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LDLRAD3Q86YD5 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LDLRAD3Q86YD5 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
LDLRAD3Q86YD5 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC18.77■□□□□ 0.6
LDLRAD3Q86YD5 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LDLRAD3Q86YD5 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LDLRAD3Q86YD5 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC18.77■□□□□ 0.6
LDLRAD3Q86YD5 CLTA-210ENST00000540080 989 ntTSL 2 BASIC18.77■□□□□ 0.6
LDLRAD3Q86YD5 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC18.77■□□□□ 0.6
LDLRAD3Q86YD5 AL117332.1-201ENST00000622628 974 ntBASIC18.77■□□□□ 0.6
LDLRAD3Q86YD5 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
LDLRAD3Q86YD5 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LDLRAD3Q86YD5 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
LDLRAD3Q86YD5 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
LDLRAD3Q86YD5 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
LDLRAD3Q86YD5 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
LDLRAD3Q86YD5 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
LDLRAD3Q86YD5 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
LDLRAD3Q86YD5 LSM4-201ENST00000252816 986 ntTSL 2 BASIC18.76■□□□□ 0.59
LDLRAD3Q86YD5 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LDLRAD3Q86YD5 MTURN-203ENST00000409688 843 ntTSL 2 BASIC18.76■□□□□ 0.59
LDLRAD3Q86YD5 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC18.76■□□□□ 0.59
LDLRAD3Q86YD5 LSM7-203ENST00000585409 512 ntTSL 2 BASIC18.76■□□□□ 0.59
LDLRAD3Q86YD5 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC18.76■□□□□ 0.59
LDLRAD3Q86YD5 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LDLRAD3Q86YD5 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
LDLRAD3Q86YD5 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LDLRAD3Q86YD5 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LDLRAD3Q86YD5 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LDLRAD3Q86YD5 AL022069.1-201ENST00000568025 1636 ntBASIC18.75■□□□□ 0.59
LDLRAD3Q86YD5 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
LDLRAD3Q86YD5 RPP21-222ENST00000433076 577 ntTSL 2 BASIC18.75■□□□□ 0.59
LDLRAD3Q86YD5 PEMT-206ENST00000435340 960 ntTSL 5 BASIC18.75■□□□□ 0.59
LDLRAD3Q86YD5 MIR3621-201ENST00000580529 85 ntBASIC18.75■□□□□ 0.59
LDLRAD3Q86YD5 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LDLRAD3Q86YD5 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC18.75■□□□□ 0.59
LDLRAD3Q86YD5 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC18.75■□□□□ 0.59
LDLRAD3Q86YD5 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LDLRAD3Q86YD5 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
LDLRAD3Q86YD5 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
LDLRAD3Q86YD5 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
LDLRAD3Q86YD5 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LDLRAD3Q86YD5 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LDLRAD3Q86YD5 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LDLRAD3Q86YD5 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC18.74■□□□□ 0.59
LDLRAD3Q86YD5 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
LDLRAD3Q86YD5 AL137060.1-201ENST00000618151 2648 ntBASIC18.74■□□□□ 0.59
LDLRAD3Q86YD5 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LDLRAD3Q86YD5 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
LDLRAD3Q86YD5 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC18.74■□□□□ 0.59
LDLRAD3Q86YD5 LINC00526-201ENST00000581067 1875 ntBASIC18.74■□□□□ 0.59
LDLRAD3Q86YD5 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC18.74■□□□□ 0.59
LDLRAD3Q86YD5 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
LDLRAD3Q86YD5 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC18.74■□□□□ 0.59
LDLRAD3Q86YD5 SRR-208ENST00000576848 588 ntTSL 4 BASIC18.74■□□□□ 0.59
LDLRAD3Q86YD5 TERT-206ENST00000508104 2486 ntTSL 5 BASIC18.74■□□□□ 0.59
LDLRAD3Q86YD5 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LDLRAD3Q86YD5 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
LDLRAD3Q86YD5 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LDLRAD3Q86YD5 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
LDLRAD3Q86YD5 AL356740.2-201ENST00000601559 647 ntBASIC18.73■□□□□ 0.59
LDLRAD3Q86YD5 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC18.73■□□□□ 0.59
LDLRAD3Q86YD5 SNX5-217ENST00000606557 1087 ntBASIC18.73■□□□□ 0.59
LDLRAD3Q86YD5 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LDLRAD3Q86YD5 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LDLRAD3Q86YD5 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
LDLRAD3Q86YD5 GUSBP5-202ENST00000510805 1989 ntBASIC18.73■□□□□ 0.59
LDLRAD3Q86YD5 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC18.73■□□□□ 0.59
LDLRAD3Q86YD5 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LDLRAD3Q86YD5 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LDLRAD3Q86YD5 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LDLRAD3Q86YD5 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LDLRAD3Q86YD5 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
LDLRAD3Q86YD5 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LDLRAD3Q86YD5 LBH-205ENST00000407930 756 ntTSL 2 BASIC18.72■□□□□ 0.59
LDLRAD3Q86YD5 AC131281.2-201ENST00000520478 145 ntBASIC18.72■□□□□ 0.59
LDLRAD3Q86YD5 TRIR-202ENST00000588213 841 ntTSL 3 BASIC18.72■□□□□ 0.59
LDLRAD3Q86YD5 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC18.72■□□□□ 0.59
LDLRAD3Q86YD5 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LDLRAD3Q86YD5 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
LDLRAD3Q86YD5 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LDLRAD3Q86YD5 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LDLRAD3Q86YD5 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms