Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 AC027612.3-201ENST00000413684 1047 ntBASIC23.57■■□□□ 1.36
VARS2Q5ST30 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC23.57■■□□□ 1.36
VARS2Q5ST30 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC23.57■■□□□ 1.36
VARS2Q5ST30 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC23.57■■□□□ 1.36
VARS2Q5ST30 AL031602.1-201ENST00000633169 911 ntBASIC23.57■■□□□ 1.36
VARS2Q5ST30 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
VARS2Q5ST30 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
VARS2Q5ST30 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC23.57■■□□□ 1.36
VARS2Q5ST30 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
VARS2Q5ST30 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
VARS2Q5ST30 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC23.57■■□□□ 1.36
VARS2Q5ST30 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
VARS2Q5ST30 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
VARS2Q5ST30 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
VARS2Q5ST30 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
VARS2Q5ST30 AC004687.1-201ENST00000579003 1625 ntBASIC23.56■■□□□ 1.36
VARS2Q5ST30 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC23.56■■□□□ 1.36
VARS2Q5ST30 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
VARS2Q5ST30 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
VARS2Q5ST30 AL354811.1-201ENST00000610286 706 ntBASIC23.56■■□□□ 1.36
VARS2Q5ST30 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
VARS2Q5ST30 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
VARS2Q5ST30 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
VARS2Q5ST30 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
VARS2Q5ST30 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
VARS2Q5ST30 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
VARS2Q5ST30 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
VARS2Q5ST30 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
VARS2Q5ST30 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
VARS2Q5ST30 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
VARS2Q5ST30 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
VARS2Q5ST30 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC23.55■■□□□ 1.36
VARS2Q5ST30 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC23.55■■□□□ 1.36
VARS2Q5ST30 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
VARS2Q5ST30 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC23.55■■□□□ 1.36
VARS2Q5ST30 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
VARS2Q5ST30 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
VARS2Q5ST30 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
VARS2Q5ST30 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC23.55■■□□□ 1.36
VARS2Q5ST30 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
VARS2Q5ST30 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
VARS2Q5ST30 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC23.54■■□□□ 1.36
VARS2Q5ST30 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
VARS2Q5ST30 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
VARS2Q5ST30 LHPP-203ENST00000392757 840 ntTSL 3 BASIC23.54■■□□□ 1.36
VARS2Q5ST30 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
VARS2Q5ST30 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC23.54■■□□□ 1.36
VARS2Q5ST30 AC034268.1-201ENST00000441047 882 ntBASIC23.54■■□□□ 1.36
VARS2Q5ST30 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
VARS2Q5ST30 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
VARS2Q5ST30 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
VARS2Q5ST30 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
VARS2Q5ST30 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
VARS2Q5ST30 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC23.54■■□□□ 1.36
VARS2Q5ST30 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC23.54■■□□□ 1.36
VARS2Q5ST30 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
VARS2Q5ST30 HACD1-201ENST00000326961 773 ntTSL 2 BASIC23.53■■□□□ 1.36
VARS2Q5ST30 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC23.53■■□□□ 1.36
VARS2Q5ST30 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC23.53■■□□□ 1.36
VARS2Q5ST30 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC23.53■■□□□ 1.36
VARS2Q5ST30 RAB43-208ENST00000615093 783 ntTSL 5 BASIC23.53■■□□□ 1.36
VARS2Q5ST30 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
VARS2Q5ST30 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC23.53■■□□□ 1.36
VARS2Q5ST30 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
VARS2Q5ST30 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
VARS2Q5ST30 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC23.52■■□□□ 1.36
VARS2Q5ST30 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
VARS2Q5ST30 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
VARS2Q5ST30 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
VARS2Q5ST30 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC23.52■■□□□ 1.36
VARS2Q5ST30 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
VARS2Q5ST30 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
VARS2Q5ST30 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
VARS2Q5ST30 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
VARS2Q5ST30 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
VARS2Q5ST30 AC123595.1-201ENST00000440769 1046 ntBASIC23.51■■□□□ 1.35
VARS2Q5ST30 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC23.51■■□□□ 1.35
VARS2Q5ST30 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
VARS2Q5ST30 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC23.51■■□□□ 1.35
VARS2Q5ST30 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC23.51■■□□□ 1.35
VARS2Q5ST30 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC23.51■■□□□ 1.35
VARS2Q5ST30 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC23.51■■□□□ 1.35
VARS2Q5ST30 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
VARS2Q5ST30 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
VARS2Q5ST30 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
VARS2Q5ST30 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
VARS2Q5ST30 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
VARS2Q5ST30 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC23.5■■□□□ 1.35
VARS2Q5ST30 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC23.5■■□□□ 1.35
VARS2Q5ST30 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
VARS2Q5ST30 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
VARS2Q5ST30 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC23.49■■□□□ 1.35
VARS2Q5ST30 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC23.49■■□□□ 1.35
VARS2Q5ST30 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
VARS2Q5ST30 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
VARS2Q5ST30 AC090192.1-201ENST00000517740 490 ntBASIC23.49■■□□□ 1.35
VARS2Q5ST30 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC23.49■■□□□ 1.35
VARS2Q5ST30 DUX4L2-201ENST00000561772 1275 ntBASIC23.49■■□□□ 1.35
VARS2Q5ST30 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC23.49■■□□□ 1.35
VARS2Q5ST30 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC23.49■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms