Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
EFNB3Q15768 TSPY26P-201ENST00000476365 1326 ntBASIC18.92■□□□□ 0.62
EFNB3Q15768 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC18.92■□□□□ 0.62
EFNB3Q15768 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
EFNB3Q15768 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
EFNB3Q15768 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC18.91■□□□□ 0.62
EFNB3Q15768 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
EFNB3Q15768 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
EFNB3Q15768 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC18.91■□□□□ 0.62
EFNB3Q15768 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
EFNB3Q15768 AP005435.1-201ENST00000529293 1178 ntBASIC18.91■□□□□ 0.62
EFNB3Q15768 AC010525.1-201ENST00000585559 441 ntBASIC18.91■□□□□ 0.62
EFNB3Q15768 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
EFNB3Q15768 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC18.91■□□□□ 0.62
EFNB3Q15768 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
EFNB3Q15768 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
EFNB3Q15768 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC18.91■□□□□ 0.62
EFNB3Q15768 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
EFNB3Q15768 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
EFNB3Q15768 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC18.9■□□□□ 0.62
EFNB3Q15768 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
EFNB3Q15768 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
EFNB3Q15768 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
EFNB3Q15768 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
EFNB3Q15768 MIR6821-201ENST00000617625 74 ntBASIC18.9■□□□□ 0.62
EFNB3Q15768 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
EFNB3Q15768 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
EFNB3Q15768 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
EFNB3Q15768 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC18.9■□□□□ 0.62
EFNB3Q15768 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
EFNB3Q15768 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.9■□□□□ 0.62
EFNB3Q15768 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC18.89■□□□□ 0.62
EFNB3Q15768 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
EFNB3Q15768 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
EFNB3Q15768 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC18.89■□□□□ 0.61
EFNB3Q15768 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
EFNB3Q15768 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC18.89■□□□□ 0.61
EFNB3Q15768 AK1-201ENST00000223836 736 ntTSL 3 BASIC18.89■□□□□ 0.61
EFNB3Q15768 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC18.89■□□□□ 0.61
EFNB3Q15768 AC097381.1-201ENST00000429019 1296 ntBASIC18.89■□□□□ 0.61
EFNB3Q15768 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
EFNB3Q15768 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC18.89■□□□□ 0.61
EFNB3Q15768 MIR5787-201ENST00000611784 55 ntBASIC18.89■□□□□ 0.61
EFNB3Q15768 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC18.89■□□□□ 0.61
EFNB3Q15768 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
EFNB3Q15768 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
EFNB3Q15768 AL353803.4-201ENST00000565882 1934 ntBASIC18.88■□□□□ 0.61
EFNB3Q15768 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
EFNB3Q15768 JTB-203ENST00000368589 1216 ntTSL 2 BASIC18.88■□□□□ 0.61
EFNB3Q15768 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
EFNB3Q15768 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC18.88■□□□□ 0.61
EFNB3Q15768 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
EFNB3Q15768 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
EFNB3Q15768 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
EFNB3Q15768 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
EFNB3Q15768 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
EFNB3Q15768 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
EFNB3Q15768 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
EFNB3Q15768 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
EFNB3Q15768 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC18.87■□□□□ 0.61
EFNB3Q15768 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.87■□□□□ 0.61
EFNB3Q15768 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
EFNB3Q15768 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
EFNB3Q15768 MIR572-201ENST00000384983 95 ntBASIC18.87■□□□□ 0.61
EFNB3Q15768 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
EFNB3Q15768 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
EFNB3Q15768 H19-210ENST00000439725 1929 ntTSL 2 BASIC18.87■□□□□ 0.61
EFNB3Q15768 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC18.87■□□□□ 0.61
EFNB3Q15768 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC18.87■□□□□ 0.61
EFNB3Q15768 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC18.87■□□□□ 0.61
EFNB3Q15768 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC18.87■□□□□ 0.61
EFNB3Q15768 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC18.87■□□□□ 0.61
EFNB3Q15768 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC18.87■□□□□ 0.61
EFNB3Q15768 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
EFNB3Q15768 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
EFNB3Q15768 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
EFNB3Q15768 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
EFNB3Q15768 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
EFNB3Q15768 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
EFNB3Q15768 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC18.86■□□□□ 0.61
EFNB3Q15768 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
EFNB3Q15768 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
EFNB3Q15768 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.86■□□□□ 0.61
EFNB3Q15768 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
EFNB3Q15768 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
EFNB3Q15768 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC18.86■□□□□ 0.61
EFNB3Q15768 AL358852.1-201ENST00000623174 1268 ntBASIC18.86■□□□□ 0.61
EFNB3Q15768 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
EFNB3Q15768 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
EFNB3Q15768 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
EFNB3Q15768 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
EFNB3Q15768 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
EFNB3Q15768 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
EFNB3Q15768 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC18.85■□□□□ 0.61
EFNB3Q15768 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
EFNB3Q15768 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
EFNB3Q15768 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
EFNB3Q15768 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.85■□□□□ 0.61
EFNB3Q15768 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC18.85■□□□□ 0.61
EFNB3Q15768 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms