Protein–RNA interactions for Protein: P53960

YNL040W, Putative alanyl-tRNA editing protein alaX, yeastyeast

Predicted RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YNL040WP53960 MAP1YLR244C 1164 nt4.04□□□□□ -1.76
YNL040WP53960 YMR082CYMR082C 357 nt4.04□□□□□ -1.76
YNL040WP53960 YBL036CYBL036C 774 nt4.04□□□□□ -1.76
YNL040WP53960 CUS2YNL286W 858 nt4.04□□□□□ -1.76
YNL040WP53960 RPL19AYBR084C-A 570 nt4.04□□□□□ -1.76
YNL040WP53960 SBE2YDR351W 2595 nt4.04□□□□□ -1.76
YNL040WP53960 LOS1YKL205W 3303 nt4.03□□□□□ -1.76
YNL040WP53960 SPT23YKL020C 3249 nt4.03□□□□□ -1.76
YNL040WP53960 PDR5YOR153W 4536 nt4.03□□□□□ -1.76
YNL040WP53960 BIK1YCL029C 1323 nt4.03□□□□□ -1.76
YNL040WP53960 INO2YDR123C 915 nt4.03□□□□□ -1.76
YNL040WP53960 YGR269WYGR269W 327 nt4.03□□□□□ -1.76
YNL040WP53960 SPO12YHR152W 522 nt4.03□□□□□ -1.76
YNL040WP53960 YLR036CYLR036C 612 nt4.03□□□□□ -1.76
YNL040WP53960 YLR125WYLR125W 411 nt4.03□□□□□ -1.76
YNL040WP53960 YOR289WYOR289W 756 nt4.03□□□□□ -1.76
YNL040WP53960 ARR1YPR199C 885 nt4.03□□□□□ -1.76
YNL040WP53960 NTH1YDR001C 2256 nt4.03□□□□□ -1.76
YNL040WP53960 ZDS1YMR273C 2748 nt4.03□□□□□ -1.76
YNL040WP53960 SKM1YOL113W 1968 nt4.03□□□□□ -1.76
YNL040WP53960 ARO80YDR421W 2853 nt4.02□□□□□ -1.77
YNL040WP53960 ORC6YHR118C 1308 nt4.02□□□□□ -1.77
YNL040WP53960 ZRC1YMR243C 1329 nt4.02□□□□□ -1.77
YNL040WP53960 KEX1YGL203C 2190 nt4.02□□□□□ -1.77
YNL040WP53960 THI22YPR121W 1719 nt4.02□□□□□ -1.77
YNL040WP53960 YLR374CYLR374C 390 nt4.02□□□□□ -1.77
YNL040WP53960 YBL029WYBL029W 1131 nt4.02□□□□□ -1.77
YNL040WP53960 NIS1YNL078W 1224 nt4.02□□□□□ -1.77
YNL040WP53960 YNL143CYNL143C 393 nt4.02□□□□□ -1.77
YNL040WP53960 PMT4YJR143C 2289 nt4.02□□□□□ -1.77
YNL040WP53960 EKI1YDR147W 1605 nt4.02□□□□□ -1.77
YNL040WP53960 SWH1YAR042W 3567 nt4.02□□□□□ -1.77
YNL040WP53960 YTM1YOR272W 1383 nt4.02□□□□□ -1.77
YNL040WP53960 USA1YML029W 2517 nt4.01□□□□□ -1.77
YNL040WP53960 IGO2YHR132W-A 396 nt4.01□□□□□ -1.77
YNL040WP53960 YKL162C-AYKL162C-A 153 nt4.01□□□□□ -1.77
YNL040WP53960 YMR147WYMR147W 672 nt4.01□□□□□ -1.77
YNL040WP53960 DSC2YOL073C 969 nt4.01□□□□□ -1.77
YNL040WP53960 SNF8YPL002C 702 nt4.01□□□□□ -1.77
YNL040WP53960 YBR196C-BYBR196C-B 105 nt4.01□□□□□ -1.77
YNL040WP53960 YCL022CYCL022C 516 nt4.01□□□□□ -1.77
YNL040WP53960 NTA1YJR062C 1374 nt4.01□□□□□ -1.77
YNL040WP53960 SWI1YPL016W 3945 nt4.01□□□□□ -1.77
YNL040WP53960 AVT7YIL088C 1473 nt4□□□□□ -1.77
YNL040WP53960 ATP5YDR298C 639 nt4□□□□□ -1.77
YNL040WP53960 YER076CYER076C 909 nt4□□□□□ -1.77
YNL040WP53960 SUP56tL(CAA)A 82 nt4□□□□□ -1.77
YNL040WP53960 SUP53tL(CAA)C 82 nt4□□□□□ -1.77
YNL040WP53960 tL(CAA)DtL(CAA)D 82 nt4□□□□□ -1.77
YNL040WP53960 tL(CAA)G1tL(CAA)G1 82 nt4□□□□□ -1.77
YNL040WP53960 SUP54tL(CAA)G2 82 nt4□□□□□ -1.77
YNL040WP53960 tL(CAA)G3tL(CAA)G3 82 nt4□□□□□ -1.77
YNL040WP53960 tL(CAA)KtL(CAA)K 82 nt4□□□□□ -1.77
YNL040WP53960 tL(CAA)LtL(CAA)L 82 nt4□□□□□ -1.77
YNL040WP53960 tL(CAA)MtL(CAA)M 82 nt4□□□□□ -1.77
YNL040WP53960 tL(CAA)NtL(CAA)N 82 nt4□□□□□ -1.77
YNL040WP53960 YLR154W-BYLR154W-B 165 nt4□□□□□ -1.77
YNL040WP53960 MRPL24YMR193W 777 nt4□□□□□ -1.77
YNL040WP53960 NAT5YOR253W 531 nt4□□□□□ -1.77
YNL040WP53960 MUM3YOR298W 1440 nt4□□□□□ -1.77
YNL040WP53960 ROD1YOR018W 2514 nt4□□□□□ -1.77
YNL040WP53960 IKS1YJL057C 2004 nt4□□□□□ -1.77
YNL040WP53960 TDA11YHR159W 1515 nt4□□□□□ -1.77
YNL040WP53960 YDL183CYDL183C 963 nt3.99□□□□□ -1.77
YNL040WP53960 UBC1YDR177W 648 nt3.99□□□□□ -1.77
YNL040WP53960 YGL108CYGL108C 423 nt3.99□□□□□ -1.77
YNL040WP53960 SOP4YJL192C 705 nt3.99□□□□□ -1.77
YNL040WP53960 NRK1YNL129W 723 nt3.99□□□□□ -1.77
YNL040WP53960 YOL079WYOL079W 399 nt3.99□□□□□ -1.77
YNL040WP53960 RET3YPL010W 570 nt3.99□□□□□ -1.77
YNL040WP53960 YPL114WYPL114W 420 nt3.99□□□□□ -1.77
YNL040WP53960 YPR150WYPR150W 522 nt3.99□□□□□ -1.77
YNL040WP53960 MDL1YLR188W 2088 nt3.99□□□□□ -1.77
YNL040WP53960 HOS2YGL194C 1359 nt3.99□□□□□ -1.77
YNL040WP53960 ELM1YKL048C 1923 nt3.99□□□□□ -1.77
YNL040WP53960 TYW1YPL207W 2433 nt3.99□□□□□ -1.77
YNL040WP53960 CLD1YGR110W 1338 nt3.98□□□□□ -1.77
YNL040WP53960 SPO77YLR341W 1434 nt3.98□□□□□ -1.77
YNL040WP53960 PPQ1YPL179W 1650 nt3.98□□□□□ -1.77
YNL040WP53960 SPR28YDR218C 1272 nt3.98□□□□□ -1.77
YNL040WP53960 YEL028WYEL028W 462 nt3.98□□□□□ -1.77
YNL040WP53960 YER034WYER034W 558 nt3.98□□□□□ -1.77
YNL040WP53960 YER085CYER085C 522 nt3.98□□□□□ -1.77
YNL040WP53960 YGL152CYGL152C 678 nt3.98□□□□□ -1.77
YNL040WP53960 SPO74YGL170C 1242 nt3.98□□□□□ -1.77
YNL040WP53960 CDC12YHR107C 1224 nt3.98□□□□□ -1.77
YNL040WP53960 LNP1YHR192W 837 nt3.98□□□□□ -1.77
YNL040WP53960 YKE4YIL023C 1041 nt3.98□□□□□ -1.77
YNL040WP53960 DCS2YOR173W 1062 nt3.98□□□□□ -1.77
YNL040WP53960 MRM1YOR201C 1239 nt3.98□□□□□ -1.77
YNL040WP53960 NAT3YPR131C 588 nt3.98□□□□□ -1.77
YNL040WP53960 BDP1YNL039W 1785 nt3.98□□□□□ -1.77
YNL040WP53960 YDR444WYDR444W 2064 nt3.98□□□□□ -1.77
YNL040WP53960 MDM30YLR368W 1797 nt3.97□□□□□ -1.77
YNL040WP53960 HST1YOL068C 1512 nt3.97□□□□□ -1.77
YNL040WP53960 GRS2YPR081C 1857 nt3.97□□□□□ -1.77
YNL040WP53960 LAP3YNL239W 1365 nt3.97□□□□□ -1.77
YNL040WP53960 SSM4YIL030C 3960 nt3.97□□□□□ -1.77
YNL040WP53960 OCT1YKL134C 2319 nt3.96□□□□□ -1.77
YNL040WP53960 HOS3YPL116W 2094 nt3.96□□□□□ -1.77
Retrieved 100 of 7,029 protein–RNA pairs in 26 ms