Protein–RNA interactions for Protein: P41817

CUP9, Homeobox protein CUP9, yeastyeast

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CUP9P41817 SRP72YPL210C 1923 nt3.47□□□□□ -1.85
CUP9P41817 CDC10YCR002C 969 nt3.47□□□□□ -1.85
CUP9P41817 AAD3YCR107W 1092 nt3.47□□□□□ -1.85
CUP9P41817 BSC1YDL037C 987 nt3.47□□□□□ -1.85
CUP9P41817 ATP5YDR298C 639 nt3.47□□□□□ -1.85
CUP9P41817 ELF1YKL160W 438 nt3.47□□□□□ -1.85
CUP9P41817 ORM2YLR350W 651 nt3.47□□□□□ -1.85
CUP9P41817 RPC19YNL113W 429 nt3.47□□□□□ -1.85
CUP9P41817 PWR1PWR1 941 nt3.47□□□□□ -1.85
CUP9P41817 YCF1YDR135C 4548 nt3.47□□□□□ -1.85
CUP9P41817 PDR5YOR153W 4536 nt3.47□□□□□ -1.85
CUP9P41817 YDL071CYDL071C 375 nt3.46□□□□□ -1.86
CUP9P41817 KTR2YKR061W 1278 nt3.46□□□□□ -1.86
CUP9P41817 ASC1YMR116C 960 nt3.46□□□□□ -1.86
CUP9P41817 SIR2YDL042C 1689 nt3.46□□□□□ -1.86
CUP9P41817 GPI18YBR004C 1302 nt3.45□□□□□ -1.86
CUP9P41817 ROD1YOR018W 2514 nt3.45□□□□□ -1.86
CUP9P41817 RAD1YPL022W 3303 nt3.45□□□□□ -1.86
CUP9P41817 YEL074WYEL074W 339 nt3.45□□□□□ -1.86
CUP9P41817 BIO2YGR286C 1128 nt3.45□□□□□ -1.86
CUP9P41817 BNA1YJR025C 534 nt3.45□□□□□ -1.86
CUP9P41817 CUS2YNL286W 858 nt3.45□□□□□ -1.86
CUP9P41817 NOC2YOR206W 2133 nt3.45□□□□□ -1.86
CUP9P41817 SSU1YPL092W 1377 nt3.45□□□□□ -1.86
CUP9P41817 ACE2YLR131C 2313 nt3.45□□□□□ -1.86
CUP9P41817 IKS1YJL057C 2004 nt3.44□□□□□ -1.86
CUP9P41817 YDR274CYDR274C 372 nt3.44□□□□□ -1.86
CUP9P41817 WSS1YHR134W 810 nt3.44□□□□□ -1.86
CUP9P41817 COX19YLL018C-A 297 nt3.44□□□□□ -1.86
CUP9P41817 YMR086C-AYMR086C-A 339 nt3.44□□□□□ -1.86
CUP9P41817 GLO4YOR040W 858 nt3.44□□□□□ -1.86
CUP9P41817 STP22YCL008C 1158 nt3.44□□□□□ -1.86
CUP9P41817 NHX1YDR456W 1902 nt3.44□□□□□ -1.86
CUP9P41817 TCO89YPL180W 2400 nt3.43□□□□□ -1.86
CUP9P41817 HCM1YCR065W 1695 nt3.43□□□□□ -1.86
CUP9P41817 RDH54YBR073W 2877 nt3.43□□□□□ -1.86
CUP9P41817 RPS11AYDR025W 471 nt3.43□□□□□ -1.86
CUP9P41817 YLR154W-BYLR154W-B 165 nt3.43□□□□□ -1.86
CUP9P41817 YOR008W-BYOR008W-B 102 nt3.43□□□□□ -1.86
CUP9P41817 MRM1YOR201C 1239 nt3.43□□□□□ -1.86
CUP9P41817 FSH3YOR280C 801 nt3.43□□□□□ -1.86
CUP9P41817 YPR174CYPR174C 666 nt3.43□□□□□ -1.86
CUP9P41817 YBR196C-BYBR196C-B 105 nt3.43□□□□□ -1.86
CUP9P41817 OM14YBR230C 405 nt3.43□□□□□ -1.86
CUP9P41817 LRG1YDL240W 3054 nt3.43□□□□□ -1.86
CUP9P41817 NOG1YPL093W 1944 nt3.42□□□□□ -1.86
CUP9P41817 PUT2YHR037W 1728 nt3.42□□□□□ -1.86
CUP9P41817 NCR1YPL006W 3513 nt3.42□□□□□ -1.86
CUP9P41817 RPB2YOR151C 3675 nt3.42□□□□□ -1.86
CUP9P41817 RPS14AYCR031C 414 nt3.42□□□□□ -1.86
CUP9P41817 HSP42YDR171W 1128 nt3.42□□□□□ -1.86
CUP9P41817 EAF5YEL018W 840 nt3.42□□□□□ -1.86
CUP9P41817 FMP48YGR052W 1110 nt3.42□□□□□ -1.86
CUP9P41817 YIL014C-AYIL014C-A 315 nt3.42□□□□□ -1.86
CUP9P41817 MBR1YKL093W 1020 nt3.42□□□□□ -1.86
CUP9P41817 YLR049CYLR049C 1287 nt3.42□□□□□ -1.86
CUP9P41817 OCA1YNL099C 717 nt3.42□□□□□ -1.86
CUP9P41817 NOP13YNL175C 1212 nt3.42□□□□□ -1.86
CUP9P41817 GAS4YOL132W 1416 nt3.42□□□□□ -1.86
CUP9P41817 MRS2YOR334W 1413 nt3.42□□□□□ -1.86
CUP9P41817 MEF2YJL102W 2460 nt3.42□□□□□ -1.86
CUP9P41817 IBA57YJR122W 1494 nt3.41□□□□□ -1.86
CUP9P41817 ARX1YDR101C 1782 nt3.41□□□□□ -1.86
CUP9P41817 IXR1YKL032C 1794 nt3.41□□□□□ -1.86
CUP9P41817 VMA1YDL185W 3216 nt3.41□□□□□ -1.86
CUP9P41817 AGA1YNR044W 2178 nt3.41□□□□□ -1.86
CUP9P41817 UBC6YER100W 753 nt3.41□□□□□ -1.86
CUP9P41817 AAD10YJR155W 867 nt3.41□□□□□ -1.86
CUP9P41817 AIM26YKL037W 357 nt3.41□□□□□ -1.86
CUP9P41817 OSW5YMR148W 447 nt3.41□□□□□ -1.86
CUP9P41817 NRK1YNL129W 723 nt3.41□□□□□ -1.86
CUP9P41817 YOL019W-AYOL019W-A 153 nt3.41□□□□□ -1.86
CUP9P41817 PIM1YBL022C 3402 nt3.41□□□□□ -1.86
CUP9P41817 IDS2YJL146W 1410 nt3.41□□□□□ -1.86
CUP9P41817 VHS3YOR054C 2025 nt3.41□□□□□ -1.86
CUP9P41817 TAF12YDR145W 1620 nt3.41□□□□□ -1.86
CUP9P41817 ERG5YMR015C 1617 nt3.41□□□□□ -1.86
CUP9P41817 GLC3YEL011W 2115 nt3.4□□□□□ -1.86
CUP9P41817 RAM1YDL090C 1296 nt3.4□□□□□ -1.87
CUP9P41817 PML1YLR016C 615 nt3.4□□□□□ -1.87
CUP9P41817 URA4YLR420W 1095 nt3.4□□□□□ -1.87
CUP9P41817 YMR114CYMR114C 1107 nt3.4□□□□□ -1.87
CUP9P41817 SMF1YOL122C 1728 nt3.4□□□□□ -1.87
CUP9P41817 OSH2YDL019C 3852 nt3.4□□□□□ -1.87
CUP9P41817 MRH4YGL064C 1686 nt3.39□□□□□ -1.87
CUP9P41817 YDR161WYDR161W 1164 nt3.39□□□□□ -1.87
CUP9P41817 YBL059WYBL059W 582 nt3.39□□□□□ -1.87
CUP9P41817 YBR141W-AYBR141W-A 96 nt3.39□□□□□ -1.87
CUP9P41817 KIN3YAR018C 1308 nt3.39□□□□□ -1.87
CUP9P41817 PRP19YLL036C 1512 nt3.39□□□□□ -1.87
CUP9P41817 TAF7YMR227C 1773 nt3.38□□□□□ -1.87
CUP9P41817 ULS1YOR191W 4860 nt3.38□□□□□ -1.87
CUP9P41817 MRPL7YDR237W 879 nt3.38□□□□□ -1.87
CUP9P41817 FOL2YGR267C 732 nt3.38□□□□□ -1.87
CUP9P41817 MRS3YJL133W 945 nt3.38□□□□□ -1.87
CUP9P41817 IMP1YMR150C 573 nt3.38□□□□□ -1.87
CUP9P41817 GRS2YPR081C 1857 nt3.38□□□□□ -1.87
CUP9P41817 ARO1YDR127W 4767 nt3.38□□□□□ -1.87
CUP9P41817 ZRC1YMR243C 1329 nt3.38□□□□□ -1.87
CUP9P41817 BCK2YER167W 2556 nt3.38□□□□□ -1.87
Retrieved 100 of 7,029 protein–RNA pairs in 20.1 ms