Protein–RNA interactions for Protein: P40968

CDC40, Pre-mRNA-processing factor 17, yeastyeast

Predicted RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC40P40968 YML053CYML053C 639 nt3.73□□□□□ -1.81
CDC40P40968 YRM1YOR172W 2361 nt3.73□□□□□ -1.81
CDC40P40968 UGA2YBR006W 1494 nt3.73□□□□□ -1.81
CDC40P40968 ISW2YOR304W 3363 nt3.72□□□□□ -1.81
CDC40P40968 SUP35YDR172W 2058 nt3.72□□□□□ -1.81
CDC40P40968 SVF1YDR346C 1446 nt3.72□□□□□ -1.81
CDC40P40968 ATP5YDR298C 639 nt3.72□□□□□ -1.81
CDC40P40968 YDR545C-AYDR545C-A 480 nt3.72□□□□□ -1.81
CDC40P40968 YEL077W-AYEL077W-A 483 nt3.72□□□□□ -1.81
CDC40P40968 YER190C-BYER190C-B 483 nt3.72□□□□□ -1.81
CDC40P40968 YFL068WYFL068W 483 nt3.72□□□□□ -1.81
CDC40P40968 RAI1YGL246C 1164 nt3.72□□□□□ -1.81
CDC40P40968 YGR296C-BYGR296C-B 483 nt3.72□□□□□ -1.81
CDC40P40968 YHL050W-AYHL050W-A 483 nt3.72□□□□□ -1.81
CDC40P40968 YHR219C-AYHR219C-A 483 nt3.72□□□□□ -1.81
CDC40P40968 FMC1YIL098C 468 nt3.72□□□□□ -1.81
CDC40P40968 YIL177W-AYIL177W-A 483 nt3.72□□□□□ -1.81
CDC40P40968 YJL225W-AYJL225W-A 483 nt3.72□□□□□ -1.81
CDC40P40968 YLL066W-AYLL066W-A 483 nt3.72□□□□□ -1.81
CDC40P40968 YLL067W-AYLL067W-A 483 nt3.72□□□□□ -1.81
CDC40P40968 ERG3YLR056W 1098 nt3.72□□□□□ -1.81
CDC40P40968 YLR466C-AYLR466C-A 483 nt3.72□□□□□ -1.81
CDC40P40968 YLR467C-AYLR467C-A 483 nt3.72□□□□□ -1.81
CDC40P40968 YML133W-BYML133W-B 483 nt3.72□□□□□ -1.81
CDC40P40968 YET2YMR040W 483 nt3.72□□□□□ -1.81
CDC40P40968 MDG1YNL173C 1101 nt3.72□□□□□ -1.81
CDC40P40968 ELA1YNL230C 1140 nt3.72□□□□□ -1.81
CDC40P40968 IST1YNL265C 897 nt3.72□□□□□ -1.81
CDC40P40968 YNL339W-BYNL339W-B 483 nt3.72□□□□□ -1.81
CDC40P40968 YBL113W-AYBL113W-A 483 nt3.72□□□□□ -1.81
CDC40P40968 YOR396C-AYOR396C-A 483 nt3.72□□□□□ -1.81
CDC40P40968 SUI3YPL237W 858 nt3.72□□□□□ -1.81
CDC40P40968 YPL283W-BYPL283W-B 483 nt3.72□□□□□ -1.81
CDC40P40968 YPR204C-AYPR204C-A 483 nt3.72□□□□□ -1.81
CDC40P40968 MNR2YKL064W 2910 nt3.72□□□□□ -1.81
CDC40P40968 AKL1YBR059C 3327 nt3.71□□□□□ -1.82
CDC40P40968 EMC1YCL045C 2283 nt3.71□□□□□ -1.82
CDC40P40968 snR57snR57 88 nt3.71□□□□□ -1.82
CDC40P40968 OCA4YCR095C 1089 nt3.71□□□□□ -1.82
CDC40P40968 YKL151CYKL151C 1014 nt3.71□□□□□ -1.82
CDC40P40968 CDC42YLR229C 576 nt3.71□□□□□ -1.82
CDC40P40968 FOL3YMR113W 1284 nt3.71□□□□□ -1.82
CDC40P40968 BUD17YNR027W 954 nt3.71□□□□□ -1.82
CDC40P40968 RAD1YPL022W 3303 nt3.71□□□□□ -1.82
CDC40P40968 PIM1YBL022C 3402 nt3.71□□□□□ -1.82
CDC40P40968 RAD28YDR030C 1521 nt3.7□□□□□ -1.82
CDC40P40968 PMC1YGL006W 3522 nt3.7□□□□□ -1.82
CDC40P40968 GET3YDL100C 1065 nt3.7□□□□□ -1.82
CDC40P40968 SLO1YER180C-A 258 nt3.7□□□□□ -1.82
CDC40P40968 SDT1YGL224C 843 nt3.7□□□□□ -1.82
CDC40P40968 CLC1YGR167W 702 nt3.7□□□□□ -1.82
CDC40P40968 YAL065CYAL065C 387 nt3.7□□□□□ -1.82
CDC40P40968 CDA2YLR308W 939 nt3.7□□□□□ -1.82
CDC40P40968 AIM39YOL053W 1188 nt3.7□□□□□ -1.82
CDC40P40968 SAM4YPL273W 978 nt3.7□□□□□ -1.82
CDC40P40968 TIF5YPR041W 1218 nt3.7□□□□□ -1.82
CDC40P40968 PEX30YLR324W 1572 nt3.7□□□□□ -1.82
CDC40P40968 VPS27YNR006W 1869 nt3.7□□□□□ -1.82
CDC40P40968 AIM14YGL160W 1713 nt3.7□□□□□ -1.82
CDC40P40968 CYM1YDR430C 2970 nt3.69□□□□□ -1.82
CDC40P40968 GAT2YMR136W 1683 nt3.69□□□□□ -1.82
CDC40P40968 YDR282CYDR282C 1245 nt3.69□□□□□ -1.82
CDC40P40968 PRE9YGR135W 777 nt3.69□□□□□ -1.82
CDC40P40968 YLF2YHL014C 1218 nt3.69□□□□□ -1.82
CDC40P40968 BAT2YJR148W 1131 nt3.69□□□□□ -1.82
CDC40P40968 UBI4YLL039C 1146 nt3.69□□□□□ -1.82
CDC40P40968 YLR156WYLR156W 345 nt3.69□□□□□ -1.82
CDC40P40968 YLR157W-DYLR157W-D 213 nt3.69□□□□□ -1.82
CDC40P40968 YLR159WYLR159W 345 nt3.69□□□□□ -1.82
CDC40P40968 YLR161WYLR161W 345 nt3.69□□□□□ -1.82
CDC40P40968 YLR194CYLR194C 765 nt3.69□□□□□ -1.82
CDC40P40968 FBP1YLR377C 1047 nt3.69□□□□□ -1.82
CDC40P40968 RRN9YMR270C 1098 nt3.69□□□□□ -1.82
CDC40P40968 PRX1YBL064C 786 nt3.69□□□□□ -1.82
CDC40P40968 SMF1YOL122C 1728 nt3.69□□□□□ -1.82
CDC40P40968 RTC5YOR118W 1704 nt3.69□□□□□ -1.82
CDC40P40968 FUN12YAL035W 3009 nt3.69□□□□□ -1.82
CDC40P40968 YPK9YOR291W 4419 nt3.69□□□□□ -1.82
CDC40P40968 IMH1YLR309C 2736 nt3.68□□□□□ -1.82
CDC40P40968 RTA1YGR213C 954 nt3.68□□□□□ -1.82
CDC40P40968 GVP36YIL041W 981 nt3.68□□□□□ -1.82
CDC40P40968 YJL028WYJL028W 336 nt3.68□□□□□ -1.82
CDC40P40968 PRM10YJL108C 1152 nt3.68□□□□□ -1.82
CDC40P40968 YBR103C-AYBR103C-A 144 nt3.68□□□□□ -1.82
CDC40P40968 ULS1YOR191W 4860 nt3.68□□□□□ -1.82
CDC40P40968 UTP25YIL091C 2166 nt3.68□□□□□ -1.82
CDC40P40968 RCK2YLR248W 1833 nt3.67□□□□□ -1.82
CDC40P40968 VHS3YOR054C 2025 nt3.67□□□□□ -1.82
CDC40P40968 RPS18AYDR450W 441 nt3.67□□□□□ -1.82
CDC40P40968 GTF1YGR102C 552 nt3.67□□□□□ -1.82
CDC40P40968 BNA1YJR025C 534 nt3.67□□□□□ -1.82
CDC40P40968 MRPL13YKR006C 795 nt3.67□□□□□ -1.82
CDC40P40968 EOS1YNL080C 1101 nt3.67□□□□□ -1.82
CDC40P40968 YOR318CYOR318C 306 nt3.67□□□□□ -1.82
CDC40P40968 RAD7YJR052W 1698 nt3.67□□□□□ -1.82
CDC40P40968 YOL075CYOL075C 3885 nt3.67□□□□□ -1.82
CDC40P40968 ATM1YMR301C 2073 nt3.67□□□□□ -1.82
CDC40P40968 NUP85YJR042W 2235 nt3.67□□□□□ -1.82
CDC40P40968 YPK3YBR028C 1578 nt3.67□□□□□ -1.82
CDC40P40968 VID28YIL017C 2766 nt3.67□□□□□ -1.82
Retrieved 100 of 7,029 protein–RNA pairs in 16.9 ms