Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CTLA4P16410 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.66■□□□□ 0.74
CTLA4P16410 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.66■□□□□ 0.74
CTLA4P16410 MIR6724-1-201ENST00000616420 92 ntBASIC19.66■□□□□ 0.74
CTLA4P16410 MIR6724-2-201ENST00000616483 92 ntBASIC19.66■□□□□ 0.74
CTLA4P16410 MIR6724-4-201ENST00000617390 92 ntBASIC19.66■□□□□ 0.74
CTLA4P16410 MIR6724-3-201ENST00000622482 92 ntBASIC19.66■□□□□ 0.74
CTLA4P16410 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CTLA4P16410 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.66■□□□□ 0.74
CTLA4P16410 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
CTLA4P16410 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.66■□□□□ 0.74
CTLA4P16410 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
CTLA4P16410 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.66■□□□□ 0.74
CTLA4P16410 C17orf82-201ENST00000623772 1530 ntBASIC19.66■□□□□ 0.74
CTLA4P16410 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CTLA4P16410 ECEL1P1-201ENST00000373592 1742 ntBASIC19.65■□□□□ 0.74
CTLA4P16410 LINC00526-201ENST00000581067 1875 ntBASIC19.65■□□□□ 0.74
CTLA4P16410 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.65■□□□□ 0.74
CTLA4P16410 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.65■□□□□ 0.74
CTLA4P16410 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.65■□□□□ 0.74
CTLA4P16410 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CTLA4P16410 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CTLA4P16410 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CTLA4P16410 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CTLA4P16410 AC127496.7-201ENST00000625110 1798 ntBASIC19.65■□□□□ 0.74
CTLA4P16410 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
CTLA4P16410 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CTLA4P16410 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CTLA4P16410 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CTLA4P16410 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
CTLA4P16410 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CTLA4P16410 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
CTLA4P16410 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CTLA4P16410 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.64■□□□□ 0.73
CTLA4P16410 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.73
CTLA4P16410 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
CTLA4P16410 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.64■□□□□ 0.73
CTLA4P16410 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.73
CTLA4P16410 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CTLA4P16410 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CTLA4P16410 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.63■□□□□ 0.73
CTLA4P16410 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CTLA4P16410 AC087742.1-201ENST00000575880 1738 ntBASIC19.63■□□□□ 0.73
CTLA4P16410 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
CTLA4P16410 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.63■□□□□ 0.73
CTLA4P16410 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CTLA4P16410 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CTLA4P16410 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CTLA4P16410 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CTLA4P16410 KRT16P3-201ENST00000439127 1283 ntBASIC19.63■□□□□ 0.73
CTLA4P16410 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19.63■□□□□ 0.73
CTLA4P16410 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CTLA4P16410 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
CTLA4P16410 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
CTLA4P16410 AC242852.2-201ENST00000615738 1807 ntBASIC19.62■□□□□ 0.73
CTLA4P16410 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
CTLA4P16410 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.62■□□□□ 0.73
CTLA4P16410 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CTLA4P16410 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CTLA4P16410 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CTLA4P16410 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CTLA4P16410 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC19.62■□□□□ 0.73
CTLA4P16410 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CTLA4P16410 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.62■□□□□ 0.73
CTLA4P16410 AC009086.3-201ENST00000623486 1008 ntBASIC19.62■□□□□ 0.73
CTLA4P16410 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CTLA4P16410 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
CTLA4P16410 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CTLA4P16410 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.62■□□□□ 0.73
CTLA4P16410 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CTLA4P16410 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.61■□□□□ 0.73
CTLA4P16410 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CTLA4P16410 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CTLA4P16410 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CTLA4P16410 GUSBP5-201ENST00000418136 578 ntBASIC19.61■□□□□ 0.73
CTLA4P16410 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC19.61■□□□□ 0.73
CTLA4P16410 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CTLA4P16410 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CTLA4P16410 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CTLA4P16410 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CTLA4P16410 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CTLA4P16410 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTLA4P16410 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.6■□□□□ 0.73
CTLA4P16410 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.6■□□□□ 0.73
CTLA4P16410 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CTLA4P16410 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CTLA4P16410 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTLA4P16410 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTLA4P16410 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTLA4P16410 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.6■□□□□ 0.73
CTLA4P16410 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CTLA4P16410 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTLA4P16410 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.6■□□□□ 0.73
CTLA4P16410 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTLA4P16410 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.6■□□□□ 0.73
CTLA4P16410 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTLA4P16410 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC19.59■□□□□ 0.73
CTLA4P16410 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CTLA4P16410 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CTLA4P16410 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms