Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC21.12■□□□□ 0.97
CCL4P13236 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.12■□□□□ 0.97
CCL4P13236 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.12■□□□□ 0.97
CCL4P13236 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCL4P13236 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CCL4P13236 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
CCL4P13236 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.11■□□□□ 0.97
CCL4P13236 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC21.11■□□□□ 0.97
CCL4P13236 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.11■□□□□ 0.97
CCL4P13236 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21.11■□□□□ 0.97
CCL4P13236 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
CCL4P13236 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC21.11■□□□□ 0.97
CCL4P13236 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
CCL4P13236 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
CCL4P13236 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.1■□□□□ 0.97
CCL4P13236 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCL4P13236 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCL4P13236 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCL4P13236 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCL4P13236 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.1■□□□□ 0.97
CCL4P13236 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCL4P13236 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
CCL4P13236 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.1■□□□□ 0.97
CCL4P13236 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCL4P13236 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.1■□□□□ 0.97
CCL4P13236 DLX3-202ENST00000512495 834 ntTSL 2 BASIC21.1■□□□□ 0.97
CCL4P13236 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.1■□□□□ 0.97
CCL4P13236 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCL4P13236 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCL4P13236 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCL4P13236 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCL4P13236 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCL4P13236 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CCL4P13236 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCL4P13236 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCL4P13236 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCL4P13236 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCL4P13236 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCL4P13236 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCL4P13236 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCL4P13236 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.09■□□□□ 0.97
CCL4P13236 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.09■□□□□ 0.97
CCL4P13236 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CCL4P13236 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC21.09■□□□□ 0.97
CCL4P13236 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CCL4P13236 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
CCL4P13236 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CCL4P13236 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCL4P13236 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCL4P13236 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCL4P13236 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21.08■□□□□ 0.97
CCL4P13236 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.08■□□□□ 0.97
CCL4P13236 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCL4P13236 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
CCL4P13236 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
CCL4P13236 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CCL4P13236 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCL4P13236 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CCL4P13236 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCL4P13236 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CCL4P13236 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCL4P13236 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.07■□□□□ 0.96
CCL4P13236 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC21.07■□□□□ 0.96
CCL4P13236 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCL4P13236 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.07■□□□□ 0.96
CCL4P13236 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CCL4P13236 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCL4P13236 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.07■□□□□ 0.96
CCL4P13236 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCL4P13236 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.06■□□□□ 0.96
CCL4P13236 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.06■□□□□ 0.96
CCL4P13236 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
CCL4P13236 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC21.06■□□□□ 0.96
CCL4P13236 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCL4P13236 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCL4P13236 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCL4P13236 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.06■□□□□ 0.96
CCL4P13236 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCL4P13236 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCL4P13236 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCL4P13236 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCL4P13236 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCL4P13236 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.05■□□□□ 0.96
CCL4P13236 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCL4P13236 LINC01124-201ENST00000409786 2117 ntBASIC21.05■□□□□ 0.96
CCL4P13236 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.05■□□□□ 0.96
CCL4P13236 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC21.05■□□□□ 0.96
CCL4P13236 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCL4P13236 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.04■□□□□ 0.96
CCL4P13236 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCL4P13236 AC079630.1-202ENST00000618127 1840 ntBASIC21.04■□□□□ 0.96
CCL4P13236 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCL4P13236 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.04■□□□□ 0.96
CCL4P13236 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.04■□□□□ 0.96
CCL4P13236 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCL4P13236 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.04■□□□□ 0.96
CCL4P13236 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCL4P13236 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCL4P13236 AC004687.1-201ENST00000579003 1625 ntBASIC21.04■□□□□ 0.96
CCL4P13236 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms