Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 MDK-213ENST00000617138 635 ntTSL 2 BASIC14.07□□□□□ -0.16
APOBP04114 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
APOBP04114 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC14.07□□□□□ -0.16
APOBP04114 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
APOBP04114 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
APOBP04114 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC14.07□□□□□ -0.16
APOBP04114 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
APOBP04114 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
APOBP04114 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC14.07□□□□□ -0.16
APOBP04114 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
APOBP04114 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
APOBP04114 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
APOBP04114 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
APOBP04114 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
APOBP04114 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
APOBP04114 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
APOBP04114 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
APOBP04114 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
APOBP04114 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC14.06□□□□□ -0.16
APOBP04114 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC14.06□□□□□ -0.16
APOBP04114 ARL16-209ENST00000573715 763 ntTSL 3 BASIC14.06□□□□□ -0.16
APOBP04114 ARL16-211ENST00000576135 694 ntTSL 3 BASIC14.06□□□□□ -0.16
APOBP04114 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC14.06□□□□□ -0.16
APOBP04114 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
APOBP04114 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
APOBP04114 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
APOBP04114 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
APOBP04114 SPI1-203ENST00000533030 661 ntTSL 2 BASIC14.05□□□□□ -0.16
APOBP04114 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
APOBP04114 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
APOBP04114 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
APOBP04114 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
APOBP04114 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
APOBP04114 DUX4L4-201ENST00000566884 1269 ntBASIC14.05□□□□□ -0.16
APOBP04114 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
APOBP04114 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
APOBP04114 EI24-204ENST00000527235 1625 ntTSL 5 BASIC14.05□□□□□ -0.16
APOBP04114 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC14.05□□□□□ -0.16
APOBP04114 PRORSD1P-201ENST00000295112 541 ntBASIC14.05□□□□□ -0.16
APOBP04114 METTL15-202ENST00000403099 795 ntTSL 5 BASIC14.05□□□□□ -0.16
APOBP04114 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
APOBP04114 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC14.05□□□□□ -0.16
APOBP04114 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC14.05□□□□□ -0.16
APOBP04114 UBE2DNL-204ENST00000602536 740 ntBASIC14.05□□□□□ -0.16
APOBP04114 PFKL-212ENST00000628044 129 ntTSL 3 BASIC14.05□□□□□ -0.16
APOBP04114 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC14.05□□□□□ -0.16
APOBP04114 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
APOBP04114 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC14.04□□□□□ -0.16
APOBP04114 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC14.04□□□□□ -0.16
APOBP04114 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC14.04□□□□□ -0.16
APOBP04114 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC14.04□□□□□ -0.16
APOBP04114 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC14.04□□□□□ -0.16
APOBP04114 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
APOBP04114 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
APOBP04114 RARA-203ENST00000394086 2008 ntTSL 2 BASIC14.04□□□□□ -0.16
APOBP04114 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
APOBP04114 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
APOBP04114 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC14.04□□□□□ -0.16
APOBP04114 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
APOBP04114 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC14.04□□□□□ -0.16
APOBP04114 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
APOBP04114 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
APOBP04114 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
APOBP04114 LSR-205ENST00000427250 1606 ntTSL 2 BASIC14.04□□□□□ -0.16
APOBP04114 CNN2P6-201ENST00000439038 900 ntBASIC14.04□□□□□ -0.16
APOBP04114 RPS2P52-201ENST00000469610 820 ntBASIC14.04□□□□□ -0.16
APOBP04114 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC14.04□□□□□ -0.16
APOBP04114 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
APOBP04114 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
APOBP04114 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
APOBP04114 AL596275.1-201ENST00000423464 877 ntBASIC14.03□□□□□ -0.16
APOBP04114 OAS3-207ENST00000551007 998 ntTSL 2 BASIC14.03□□□□□ -0.16
APOBP04114 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
APOBP04114 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
APOBP04114 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
APOBP04114 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC14.03□□□□□ -0.16
APOBP04114 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
APOBP04114 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
APOBP04114 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC14.03□□□□□ -0.16
APOBP04114 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
APOBP04114 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC14.03□□□□□ -0.16
APOBP04114 AC005181.1-201ENST00000604782 1256 ntBASIC14.03□□□□□ -0.16
APOBP04114 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC14.03□□□□□ -0.16
APOBP04114 CEBPA-AS1-201ENST00000592982 2198 ntBASIC14.03□□□□□ -0.16
APOBP04114 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
APOBP04114 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC14.03□□□□□ -0.16
APOBP04114 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
APOBP04114 KRT19P1-201ENST00000405746 1186 ntBASIC14.03□□□□□ -0.16
APOBP04114 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
APOBP04114 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
APOBP04114 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
APOBP04114 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
APOBP04114 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
APOBP04114 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC14.02□□□□□ -0.16
APOBP04114 AC073210.2-201ENST00000430369 194 ntBASIC14.02□□□□□ -0.16
APOBP04114 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC14.02□□□□□ -0.16
APOBP04114 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
APOBP04114 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC14.02□□□□□ -0.17
APOBP04114 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC14.02□□□□□ -0.17
APOBP04114 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 12.3 ms