Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
PDGFBP01127 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC22.62■■□□□ 1.21
PDGFBP01127 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC22.62■■□□□ 1.21
PDGFBP01127 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC22.62■■□□□ 1.21
PDGFBP01127 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC22.62■■□□□ 1.21
PDGFBP01127 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
PDGFBP01127 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC22.62■■□□□ 1.21
PDGFBP01127 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PDGFBP01127 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC22.61■■□□□ 1.21
PDGFBP01127 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PDGFBP01127 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC22.61■■□□□ 1.21
PDGFBP01127 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
PDGFBP01127 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
PDGFBP01127 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC22.61■■□□□ 1.21
PDGFBP01127 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
PDGFBP01127 METTL15-202ENST00000403099 795 ntTSL 5 BASIC22.61■■□□□ 1.21
PDGFBP01127 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
PDGFBP01127 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC22.61■■□□□ 1.21
PDGFBP01127 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC22.61■■□□□ 1.21
PDGFBP01127 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
PDGFBP01127 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC22.61■■□□□ 1.21
PDGFBP01127 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PDGFBP01127 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PDGFBP01127 EI24-204ENST00000527235 1625 ntTSL 5 BASIC22.6■■□□□ 1.21
PDGFBP01127 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PDGFBP01127 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC22.6■■□□□ 1.21
PDGFBP01127 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC22.6■■□□□ 1.21
PDGFBP01127 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
PDGFBP01127 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
PDGFBP01127 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PDGFBP01127 BX005040.4-201ENST00000637145 1518 ntBASIC22.6■■□□□ 1.21
PDGFBP01127 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC22.6■■□□□ 1.21
PDGFBP01127 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PDGFBP01127 STX4-202ENST00000394998 1498 ntTSL 2 BASIC22.6■■□□□ 1.21
PDGFBP01127 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PDGFBP01127 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
PDGFBP01127 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PDGFBP01127 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
PDGFBP01127 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
PDGFBP01127 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC22.59■■□□□ 1.21
PDGFBP01127 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC22.59■■□□□ 1.21
PDGFBP01127 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
PDGFBP01127 TBCB-214ENST00000629269 413 ntTSL 5 BASIC22.59■■□□□ 1.21
PDGFBP01127 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
PDGFBP01127 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
PDGFBP01127 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PDGFBP01127 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PDGFBP01127 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PDGFBP01127 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC22.58■■□□□ 1.21
PDGFBP01127 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC22.58■■□□□ 1.21
PDGFBP01127 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC22.58■■□□□ 1.21
PDGFBP01127 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC22.58■■□□□ 1.21
PDGFBP01127 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC22.58■■□□□ 1.21
PDGFBP01127 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PDGFBP01127 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC22.58■■□□□ 1.2
PDGFBP01127 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
PDGFBP01127 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
PDGFBP01127 AL161729.1-201ENST00000604104 1402 ntBASIC22.57■■□□□ 1.2
PDGFBP01127 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC22.57■■□□□ 1.2
PDGFBP01127 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PDGFBP01127 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC22.57■■□□□ 1.2
PDGFBP01127 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
PDGFBP01127 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PDGFBP01127 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC22.57■■□□□ 1.2
PDGFBP01127 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PDGFBP01127 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC22.57■■□□□ 1.2
PDGFBP01127 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC22.57■■□□□ 1.2
PDGFBP01127 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PDGFBP01127 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PDGFBP01127 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PDGFBP01127 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PDGFBP01127 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PDGFBP01127 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC22.56■■□□□ 1.2
PDGFBP01127 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PDGFBP01127 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC22.56■■□□□ 1.2
PDGFBP01127 PFKL-212ENST00000628044 129 ntTSL 3 BASIC22.56■■□□□ 1.2
PDGFBP01127 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
PDGFBP01127 HLA-L-211ENST00000482052 1765 ntBASIC22.55■■□□□ 1.2
PDGFBP01127 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
PDGFBP01127 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
PDGFBP01127 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC22.55■■□□□ 1.2
PDGFBP01127 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PDGFBP01127 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC22.55■■□□□ 1.2
PDGFBP01127 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC22.55■■□□□ 1.2
PDGFBP01127 RGMA-211ENST00000557420 989 ntTSL 3 BASIC22.55■■□□□ 1.2
PDGFBP01127 AC098934.4-201ENST00000564127 592 ntBASIC22.55■■□□□ 1.2
PDGFBP01127 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC22.55■■□□□ 1.2
PDGFBP01127 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC22.55■■□□□ 1.2
PDGFBP01127 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PDGFBP01127 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PDGFBP01127 AC092803.2-201ENST00000564287 1899 ntBASIC22.54■■□□□ 1.2
PDGFBP01127 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PDGFBP01127 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC22.54■■□□□ 1.2
PDGFBP01127 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
PDGFBP01127 SLC29A4P1-201ENST00000398760 971 ntBASIC22.54■■□□□ 1.2
PDGFBP01127 OAS3-207ENST00000551007 998 ntTSL 2 BASIC22.54■■□□□ 1.2
PDGFBP01127 AC005181.1-201ENST00000604782 1256 ntBASIC22.54■■□□□ 1.2
PDGFBP01127 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PDGFBP01127 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PDGFBP01127 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms