Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LINC01546A6NGU7 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LINC01546A6NGU7 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
LINC01546A6NGU7 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
LINC01546A6NGU7 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LINC01546A6NGU7 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC15.72■□□□□ 0.11
LINC01546A6NGU7 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
LINC01546A6NGU7 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC15.72■□□□□ 0.11
LINC01546A6NGU7 AL592295.1-201ENST00000400984 884 ntBASIC15.72■□□□□ 0.11
LINC01546A6NGU7 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC15.72■□□□□ 0.11
LINC01546A6NGU7 GFER-205ENST00000569451 517 ntTSL 5 BASIC15.72■□□□□ 0.11
LINC01546A6NGU7 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LINC01546A6NGU7 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
LINC01546A6NGU7 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
LINC01546A6NGU7 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
LINC01546A6NGU7 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC15.72■□□□□ 0.11
LINC01546A6NGU7 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
LINC01546A6NGU7 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LINC01546A6NGU7 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC15.72■□□□□ 0.11
LINC01546A6NGU7 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC15.72■□□□□ 0.11
LINC01546A6NGU7 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LINC01546A6NGU7 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LINC01546A6NGU7 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC15.71■□□□□ 0.11
LINC01546A6NGU7 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
LINC01546A6NGU7 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LINC01546A6NGU7 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
LINC01546A6NGU7 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LINC01546A6NGU7 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC15.71■□□□□ 0.11
LINC01546A6NGU7 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LINC01546A6NGU7 TUB-203ENST00000534099 1759 ntTSL 2 BASIC15.71■□□□□ 0.11
LINC01546A6NGU7 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
LINC01546A6NGU7 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
LINC01546A6NGU7 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
LINC01546A6NGU7 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LINC01546A6NGU7 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LINC01546A6NGU7 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LINC01546A6NGU7 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LINC01546A6NGU7 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LINC01546A6NGU7 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LINC01546A6NGU7 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC15.7■□□□□ 0.1
LINC01546A6NGU7 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC15.7■□□□□ 0.1
LINC01546A6NGU7 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
LINC01546A6NGU7 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
LINC01546A6NGU7 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LINC01546A6NGU7 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LINC01546A6NGU7 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
LINC01546A6NGU7 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LINC01546A6NGU7 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC15.69■□□□□ 0.1
LINC01546A6NGU7 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC15.69■□□□□ 0.1
LINC01546A6NGU7 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LINC01546A6NGU7 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC15.69■□□□□ 0.1
LINC01546A6NGU7 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC15.69■□□□□ 0.1
LINC01546A6NGU7 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LINC01546A6NGU7 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LINC01546A6NGU7 CR559946.2-201ENST00000623684 991 ntBASIC15.69■□□□□ 0.1
LINC01546A6NGU7 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
LINC01546A6NGU7 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LINC01546A6NGU7 AL157384.1-201ENST00000445995 2473 ntBASIC15.69■□□□□ 0.1
LINC01546A6NGU7 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LINC01546A6NGU7 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
LINC01546A6NGU7 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
LINC01546A6NGU7 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LINC01546A6NGU7 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LINC01546A6NGU7 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LINC01546A6NGU7 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LINC01546A6NGU7 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LINC01546A6NGU7 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LINC01546A6NGU7 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LINC01546A6NGU7 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LINC01546A6NGU7 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC15.68■□□□□ 0.1
LINC01546A6NGU7 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LINC01546A6NGU7 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LINC01546A6NGU7 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
LINC01546A6NGU7 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LINC01546A6NGU7 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
LINC01546A6NGU7 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LINC01546A6NGU7 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LINC01546A6NGU7 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LINC01546A6NGU7 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
LINC01546A6NGU7 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
LINC01546A6NGU7 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LINC01546A6NGU7 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
LINC01546A6NGU7 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LINC01546A6NGU7 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
LINC01546A6NGU7 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LINC01546A6NGU7 FEM1AP4-201ENST00000443167 1987 ntBASIC15.67■□□□□ 0.1
LINC01546A6NGU7 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC15.67■□□□□ 0.1
LINC01546A6NGU7 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC15.67■□□□□ 0.1
LINC01546A6NGU7 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
LINC01546A6NGU7 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LINC01546A6NGU7 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LINC01546A6NGU7 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LINC01546A6NGU7 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
LINC01546A6NGU7 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC15.67■□□□□ 0.1
LINC01546A6NGU7 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LINC01546A6NGU7 Z98882.1-201ENST00000622160 2253 ntBASIC15.66■□□□□ 0.1
LINC01546A6NGU7 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
LINC01546A6NGU7 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC15.66■□□□□ 0.1
LINC01546A6NGU7 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LINC01546A6NGU7 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms