Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRAV17A0A0B4J275 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRAV17A0A0B4J275 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.18■□□□□ 0.82
TRAV17A0A0B4J275 LINC00543-201ENST00000567234 1845 ntBASIC20.18■□□□□ 0.82
TRAV17A0A0B4J275 AC020928.2-201ENST00000588717 2197 ntBASIC20.18■□□□□ 0.82
TRAV17A0A0B4J275 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRAV17A0A0B4J275 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRAV17A0A0B4J275 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.18■□□□□ 0.82
TRAV17A0A0B4J275 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
TRAV17A0A0B4J275 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
TRAV17A0A0B4J275 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.18■□□□□ 0.82
TRAV17A0A0B4J275 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.18■□□□□ 0.82
TRAV17A0A0B4J275 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
TRAV17A0A0B4J275 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.18■□□□□ 0.82
TRAV17A0A0B4J275 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.18■□□□□ 0.82
TRAV17A0A0B4J275 NTF6G-201ENST00000591094 616 ntBASIC20.18■□□□□ 0.82
TRAV17A0A0B4J275 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRAV17A0A0B4J275 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.18■□□□□ 0.82
TRAV17A0A0B4J275 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.18■□□□□ 0.82
TRAV17A0A0B4J275 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.18■□□□□ 0.82
TRAV17A0A0B4J275 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.18■□□□□ 0.82
TRAV17A0A0B4J275 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.18■□□□□ 0.82
TRAV17A0A0B4J275 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
TRAV17A0A0B4J275 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRAV17A0A0B4J275 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRAV17A0A0B4J275 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
TRAV17A0A0B4J275 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC20.17■□□□□ 0.82
TRAV17A0A0B4J275 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.17■□□□□ 0.82
TRAV17A0A0B4J275 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TRAV17A0A0B4J275 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.17■□□□□ 0.82
TRAV17A0A0B4J275 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRAV17A0A0B4J275 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRAV17A0A0B4J275 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
TRAV17A0A0B4J275 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRAV17A0A0B4J275 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TRAV17A0A0B4J275 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRAV17A0A0B4J275 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
TRAV17A0A0B4J275 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TRAV17A0A0B4J275 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TRAV17A0A0B4J275 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.16■□□□□ 0.82
TRAV17A0A0B4J275 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.16■□□□□ 0.82
TRAV17A0A0B4J275 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TRAV17A0A0B4J275 AC068587.7-201ENST00000641602 218 ntBASIC20.16■□□□□ 0.82
TRAV17A0A0B4J275 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRAV17A0A0B4J275 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.16■□□□□ 0.82
TRAV17A0A0B4J275 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TRAV17A0A0B4J275 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRAV17A0A0B4J275 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRAV17A0A0B4J275 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.15■□□□□ 0.82
TRAV17A0A0B4J275 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRAV17A0A0B4J275 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRAV17A0A0B4J275 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TRAV17A0A0B4J275 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRAV17A0A0B4J275 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TRAV17A0A0B4J275 AC090192.1-201ENST00000517740 490 ntBASIC20.15■□□□□ 0.82
TRAV17A0A0B4J275 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.15■□□□□ 0.82
TRAV17A0A0B4J275 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.15■□□□□ 0.82
TRAV17A0A0B4J275 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRAV17A0A0B4J275 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRAV17A0A0B4J275 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.15■□□□□ 0.82
TRAV17A0A0B4J275 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRAV17A0A0B4J275 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.15■□□□□ 0.82
TRAV17A0A0B4J275 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
TRAV17A0A0B4J275 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
TRAV17A0A0B4J275 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRAV17A0A0B4J275 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
TRAV17A0A0B4J275 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
TRAV17A0A0B4J275 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRAV17A0A0B4J275 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.14■□□□□ 0.81
TRAV17A0A0B4J275 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TRAV17A0A0B4J275 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRAV17A0A0B4J275 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.14■□□□□ 0.81
TRAV17A0A0B4J275 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
TRAV17A0A0B4J275 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.14■□□□□ 0.81
TRAV17A0A0B4J275 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.14■□□□□ 0.81
TRAV17A0A0B4J275 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.14■□□□□ 0.81
TRAV17A0A0B4J275 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.14■□□□□ 0.81
TRAV17A0A0B4J275 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRAV17A0A0B4J275 LINC01124-201ENST00000409786 2117 ntBASIC20.14■□□□□ 0.81
TRAV17A0A0B4J275 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.13■□□□□ 0.81
TRAV17A0A0B4J275 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.13■□□□□ 0.81
TRAV17A0A0B4J275 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRAV17A0A0B4J275 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.13■□□□□ 0.81
TRAV17A0A0B4J275 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.13■□□□□ 0.81
TRAV17A0A0B4J275 AC092437.1-201ENST00000624794 1048 ntBASIC20.13■□□□□ 0.81
TRAV17A0A0B4J275 AC079630.1-202ENST00000618127 1840 ntBASIC20.13■□□□□ 0.81
TRAV17A0A0B4J275 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRAV17A0A0B4J275 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRAV17A0A0B4J275 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRAV17A0A0B4J275 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRAV17A0A0B4J275 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRAV17A0A0B4J275 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TRAV17A0A0B4J275 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TRAV17A0A0B4J275 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
TRAV17A0A0B4J275 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRAV17A0A0B4J275 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
TRAV17A0A0B4J275 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TRAV17A0A0B4J275 AC087239.1-201ENST00000622671 572 ntBASIC20.12■□□□□ 0.81
TRAV17A0A0B4J275 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
TRAV17A0A0B4J275 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms