Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
TRAV18A0A075B6X5 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.03■□□□□ 0.64
TRAV18A0A075B6X5 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.02■□□□□ 0.64
TRAV18A0A075B6X5 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
TRAV18A0A075B6X5 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRAV18A0A075B6X5 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
TRAV18A0A075B6X5 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.64
TRAV18A0A075B6X5 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRAV18A0A075B6X5 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TRAV18A0A075B6X5 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.02■□□□□ 0.64
TRAV18A0A075B6X5 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TRAV18A0A075B6X5 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRAV18A0A075B6X5 MIR6765-201ENST00000614092 87 ntBASIC19.02■□□□□ 0.64
TRAV18A0A075B6X5 AC011551.1-201ENST00000614101 683 ntBASIC19.02■□□□□ 0.64
TRAV18A0A075B6X5 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
TRAV18A0A075B6X5 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC19.02■□□□□ 0.64
TRAV18A0A075B6X5 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRAV18A0A075B6X5 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.02■□□□□ 0.63
TRAV18A0A075B6X5 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC19.02■□□□□ 0.63
TRAV18A0A075B6X5 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
TRAV18A0A075B6X5 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TRAV18A0A075B6X5 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRAV18A0A075B6X5 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRAV18A0A075B6X5 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRAV18A0A075B6X5 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRAV18A0A075B6X5 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
TRAV18A0A075B6X5 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.01■□□□□ 0.63
TRAV18A0A075B6X5 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRAV18A0A075B6X5 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRAV18A0A075B6X5 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRAV18A0A075B6X5 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
TRAV18A0A075B6X5 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRAV18A0A075B6X5 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRAV18A0A075B6X5 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19■□□□□ 0.63
TRAV18A0A075B6X5 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRAV18A0A075B6X5 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19■□□□□ 0.63
TRAV18A0A075B6X5 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19■□□□□ 0.63
TRAV18A0A075B6X5 LONRF2P2-201ENST00000439212 571 ntBASIC19■□□□□ 0.63
TRAV18A0A075B6X5 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC19■□□□□ 0.63
TRAV18A0A075B6X5 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRAV18A0A075B6X5 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRAV18A0A075B6X5 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19■□□□□ 0.63
TRAV18A0A075B6X5 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRAV18A0A075B6X5 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19■□□□□ 0.63
TRAV18A0A075B6X5 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
TRAV18A0A075B6X5 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19■□□□□ 0.63
TRAV18A0A075B6X5 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRAV18A0A075B6X5 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18.99■□□□□ 0.63
TRAV18A0A075B6X5 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC18.99■□□□□ 0.63
TRAV18A0A075B6X5 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.99■□□□□ 0.63
TRAV18A0A075B6X5 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV18A0A075B6X5 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV18A0A075B6X5 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV18A0A075B6X5 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.98■□□□□ 0.63
TRAV18A0A075B6X5 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.98■□□□□ 0.63
TRAV18A0A075B6X5 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV18A0A075B6X5 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV18A0A075B6X5 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV18A0A075B6X5 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC18.98■□□□□ 0.63
TRAV18A0A075B6X5 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
TRAV18A0A075B6X5 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV18A0A075B6X5 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC18.98■□□□□ 0.63
TRAV18A0A075B6X5 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC18.98■□□□□ 0.63
TRAV18A0A075B6X5 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV18A0A075B6X5 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV18A0A075B6X5 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV18A0A075B6X5 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV18A0A075B6X5 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV18A0A075B6X5 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV18A0A075B6X5 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.97■□□□□ 0.63
TRAV18A0A075B6X5 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
TRAV18A0A075B6X5 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV18A0A075B6X5 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV18A0A075B6X5 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV18A0A075B6X5 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC18.97■□□□□ 0.63
TRAV18A0A075B6X5 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.97■□□□□ 0.63
TRAV18A0A075B6X5 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
TRAV18A0A075B6X5 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
TRAV18A0A075B6X5 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV18A0A075B6X5 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
TRAV18A0A075B6X5 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV18A0A075B6X5 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV18A0A075B6X5 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
TRAV18A0A075B6X5 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
TRAV18A0A075B6X5 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
TRAV18A0A075B6X5 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV18A0A075B6X5 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
TRAV18A0A075B6X5 AC087742.1-201ENST00000575880 1738 ntBASIC18.95■□□□□ 0.62
TRAV18A0A075B6X5 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV18A0A075B6X5 LBH-205ENST00000407930 756 ntTSL 2 BASIC18.95■□□□□ 0.62
TRAV18A0A075B6X5 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC18.95■□□□□ 0.62
TRAV18A0A075B6X5 DUX4L9-201ENST00000449051 1259 ntBASIC18.95■□□□□ 0.62
TRAV18A0A075B6X5 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
TRAV18A0A075B6X5 GAK-223ENST00000628912 497 ntTSL 5 BASIC18.95■□□□□ 0.62
TRAV18A0A075B6X5 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV18A0A075B6X5 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV18A0A075B6X5 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
TRAV18A0A075B6X5 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV18A0A075B6X5 AC026310.3-201ENST00000625186 2373 ntBASIC18.95■□□□□ 0.62
TRAV18A0A075B6X5 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms