Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 KRT17P4-206ENST00000584151 719 ntTSL 4 BASIC16.98■□□□□ 0.31
CHL1O00533 AC016582.2-202ENST00000587765 1094 ntBASIC16.98■□□□□ 0.31
CHL1O00533 AC136475.7-201ENST00000602949 592 ntBASIC16.98■□□□□ 0.31
CHL1O00533 KRTAP10-4-202ENST00000616689 597 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
CHL1O00533 AC020922.4-201ENST00000621389 339 ntBASIC16.98■□□□□ 0.31
CHL1O00533 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC16.98■□□□□ 0.31
CHL1O00533 AL592295.4-201ENST00000636161 997 ntTSL 4 BASIC16.98■□□□□ 0.31
CHL1O00533 LILRA6-203ENST00000396365 1890 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHL1O00533 FGF10-AS1-201ENST00000502457 1894 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CHL1O00533 HTR4-201ENST00000360693 3082 ntTSL 5 BASIC16.98■□□□□ 0.31
CHL1O00533 OS9-218ENST00000551035 2246 ntTSL 2 BASIC16.98■□□□□ 0.31
CHL1O00533 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHL1O00533 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CHL1O00533 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC16.98■□□□□ 0.31
CHL1O00533 YAP1P1-201ENST00000401504 1393 ntBASIC16.98■□□□□ 0.31
CHL1O00533 HLF-202ENST00000430986 1385 ntTSL 2 BASIC16.98■□□□□ 0.31
CHL1O00533 SAP18-208ENST00000621421 2300 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHL1O00533 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHL1O00533 AC010547.1-201ENST00000500612 2793 ntTSL 2 BASIC16.98■□□□□ 0.31
CHL1O00533 TAF11-202ENST00000420584 1465 ntTSL 2 BASIC16.98■□□□□ 0.31
CHL1O00533 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHL1O00533 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHL1O00533 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHL1O00533 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC16.98■□□□□ 0.31
CHL1O00533 PLXNA4-203ENST00000378539 2004 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CHL1O00533 AC119674.2-203ENST00000642129 1675 ntAPPRIS P5 BASIC16.97■□□□□ 0.31
CHL1O00533 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHL1O00533 STK24-201ENST00000376547 2492 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHL1O00533 LINC02228-202ENST00000641261 2489 ntBASIC16.97■□□□□ 0.31
CHL1O00533 FAM114A2-211ENST00000520667 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHL1O00533 TRIP12-205ENST00000409677 1507 ntTSL 2 BASIC16.97■□□□□ 0.31
CHL1O00533 FOSB-203ENST00000443841 3346 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CHL1O00533 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHL1O00533 MRPS16-202ENST00000372945 2634 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHL1O00533 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHL1O00533 C3orf56-201ENST00000624688 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHL1O00533 RNA5SP248-201ENST00000365602 127 ntBASIC16.97■□□□□ 0.31
CHL1O00533 LCE2D-201ENST00000368784 609 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHL1O00533 CA6-201ENST00000377436 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHL1O00533 CA6-202ENST00000377442 747 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CHL1O00533 NQO2-204ENST00000380454 851 ntTSL 2 BASIC16.97■□□□□ 0.31
CHL1O00533 LIMS2-203ENST00000409254 867 ntTSL 3 BASIC16.97■□□□□ 0.31
CHL1O00533 OR7E37P-201ENST00000421076 897 ntBASIC16.97■□□□□ 0.31
CHL1O00533 AL357558.2-201ENST00000431915 425 ntTSL 2 BASIC16.97■□□□□ 0.31
CHL1O00533 AC104623.1-201ENST00000446357 546 ntTSL 4 BASIC16.97■□□□□ 0.31
CHL1O00533 RN7SL523P-201ENST00000484401 298 ntBASIC16.97■□□□□ 0.31
CHL1O00533 WWC2-208ENST00000508747 1216 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CHL1O00533 TIMM10-202ENST00000525158 530 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CHL1O00533 WASIR2-201ENST00000527434 1054 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CHL1O00533 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC16.97■□□□□ 0.31
CHL1O00533 AC005845.1-201ENST00000539206 653 ntTSL 3 BASIC16.97■□□□□ 0.31
CHL1O00533 RBMX-209ENST00000565438 1292 ntTSL 5 BASIC16.97■□□□□ 0.31
CHL1O00533 AL031710.1-201ENST00000570022 468 ntTSL 2 BASIC16.97■□□□□ 0.31
CHL1O00533 RN7SL121P-201ENST00000584223 273 ntBASIC16.97■□□□□ 0.31
CHL1O00533 CLPP-205ENST00000596605 646 ntTSL 2 BASIC16.97■□□□□ 0.31
CHL1O00533 AL353622.2-201ENST00000605846 425 ntBASIC16.97■□□□□ 0.31
CHL1O00533 RNF146-211ENST00000609447 607 ntTSL 4 BASIC16.97■□□□□ 0.31
CHL1O00533 CTSH-218ENST00000615999 972 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CHL1O00533 AL031666.1-201ENST00000413818 1809 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CHL1O00533 GJB5-201ENST00000338513 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHL1O00533 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CHL1O00533 AL121753.2-201ENST00000624581 1461 ntBASIC16.97■□□□□ 0.31
CHL1O00533 TRMT2B-202ENST00000372936 3327 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHL1O00533 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHL1O00533 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHL1O00533 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CHL1O00533 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC16.97■□□□□ 0.31
CHL1O00533 LINC02465-203ENST00000513875 1777 ntTSL 5 BASIC16.97■□□□□ 0.31
CHL1O00533 MEFV-209ENST00000541159 1888 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CHL1O00533 SULT2A1-201ENST00000222002 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHL1O00533 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHL1O00533 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHL1O00533 ZNF684-203ENST00000372699 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHL1O00533 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CHL1O00533 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHL1O00533 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHL1O00533 MMP19-202ENST00000409200 1431 ntTSL 2 BASIC16.96■□□□□ 0.31
CHL1O00533 Z98257.2-202ENST00000641138 1548 ntBASIC16.96■□□□□ 0.31
CHL1O00533 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC16.96■□□□□ 0.31
CHL1O00533 CYFIP2-222ENST00000620254 4124 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHL1O00533 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHL1O00533 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CHL1O00533 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
CHL1O00533 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHL1O00533 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHL1O00533 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC16.96■□□□□ 0.31
CHL1O00533 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CHL1O00533 ARR3-201ENST00000307959 1292 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHL1O00533 WFDC2-203ENST00000342873 818 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CHL1O00533 TREM2-202ENST00000373113 1044 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHL1O00533 ASPDH-201ENST00000376916 848 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CHL1O00533 CMTM5-204ENST00000382809 378 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CHL1O00533 CR769775.1-203ENST00000399894 579 ntTSL 3 BASIC16.96■□□□□ 0.31
CHL1O00533 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC16.96■□□□□ 0.31
CHL1O00533 AC092612.1-201ENST00000514501 998 ntBASIC16.96■□□□□ 0.31
CHL1O00533 STMN4-203ENST00000519614 1273 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CHL1O00533 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC16.96■□□□□ 0.31
CHL1O00533 SRP14-208ENST00000560773 468 ntTSL 3 BASIC16.96■□□□□ 0.31
CHL1O00533 MIR5001-201ENST00000580185 100 ntBASIC16.96■□□□□ 0.31
CHL1O00533 AC006116.2-201ENST00000589958 988 ntBASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms