Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 DNASE1L1-205ENST00000369809 3008 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
AP3S1Q92572 LITAF-203ENST00000413364 2292 ntTSL 2 BASIC11.88□□□□□ -0.51
AP3S1Q92572 RNF217-210ENST00000521654 11325 ntAPPRIS P2 TSL 2 BASIC11.88□□□□□ -0.51
AP3S1Q92572 AC018645.3-201ENST00000628855 2646 ntBASIC11.88□□□□□ -0.51
AP3S1Q92572 R3HDM2-215ENST00000634871 4092 ntTSL 5 BASIC11.88□□□□□ -0.51
AP3S1Q92572 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
AP3S1Q92572 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
AP3S1Q92572 MGST3-203ENST00000367885 680 ntTSL 2 BASIC11.88□□□□□ -0.51
AP3S1Q92572 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC11.88□□□□□ -0.51
AP3S1Q92572 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC11.88□□□□□ -0.51
AP3S1Q92572 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
AP3S1Q92572 MRPS18AP1-201ENST00000414458 589 ntBASIC11.88□□□□□ -0.51
AP3S1Q92572 ACTG1P3-201ENST00000431775 1114 ntBASIC11.88□□□□□ -0.51
AP3S1Q92572 HCG2040054-202ENST00000439182 362 ntTSL 3 BASIC11.88□□□□□ -0.51
AP3S1Q92572 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC11.88□□□□□ -0.51
AP3S1Q92572 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
AP3S1Q92572 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC11.88□□□□□ -0.51
AP3S1Q92572 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC11.88□□□□□ -0.51
AP3S1Q92572 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC11.88□□□□□ -0.51
AP3S1Q92572 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC11.88□□□□□ -0.51
AP3S1Q92572 DUX4L27-201ENST00000554796 1261 ntBASIC11.88□□□□□ -0.51
AP3S1Q92572 IFI27L1-212ENST00000557218 413 ntTSL 3 BASIC11.88□□□□□ -0.51
AP3S1Q92572 PPY2P-201ENST00000582808 702 ntBASIC11.88□□□□□ -0.51
AP3S1Q92572 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
AP3S1Q92572 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC11.88□□□□□ -0.51
AP3S1Q92572 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC11.88□□□□□ -0.51
AP3S1Q92572 DPY19L1-201ENST00000310974 4870 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
AP3S1Q92572 RBM15-205ENST00000618772 3431 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
AP3S1Q92572 RNF113A-201ENST00000371442 1353 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
AP3S1Q92572 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
AP3S1Q92572 NT5E-201ENST00000257770 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
AP3S1Q92572 PPP4R1-202ENST00000400555 3885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
AP3S1Q92572 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
AP3S1Q92572 OVOL1-201ENST00000335987 3034 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
AP3S1Q92572 AC009093.1-201ENST00000566070 2099 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
AP3S1Q92572 SCN8A-208ENST00000599343 5976 ntAPPRIS ALT1 TSL 5 BASIC11.88□□□□□ -0.51
AP3S1Q92572 TJP2-209ENST00000539225 3838 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
AP3S1Q92572 AC011511.5-201ENST00000589379 3219 ntBASIC11.88□□□□□ -0.51
AP3S1Q92572 CST9-201ENST00000376971 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
AP3S1Q92572 CYP4F23P-201ENST00000593402 1579 ntBASIC11.88□□□□□ -0.51
AP3S1Q92572 DAXX-203ENST00000414083 2355 ntTSL 2 BASIC11.87□□□□□ -0.51
AP3S1Q92572 PHF21B-202ENST00000396103 3540 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
AP3S1Q92572 AC007598.3-201ENST00000623077 1678 ntBASIC11.87□□□□□ -0.51
AP3S1Q92572 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
AP3S1Q92572 KIF14-201ENST00000367350 7274 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
AP3S1Q92572 DDX19B-208ENST00000563392 1760 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
AP3S1Q92572 AIF1L-201ENST00000247291 3364 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
AP3S1Q92572 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
AP3S1Q92572 CDK5RAP1-201ENST00000339269 1891 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
AP3S1Q92572 RNF115-202ENST00000582693 9117 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
AP3S1Q92572 ILF3-219ENST00000590261 3219 ntAPPRIS P3 TSL 5 BASIC11.87□□□□□ -0.51
AP3S1Q92572 POFUT2-203ENST00000349485 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
AP3S1Q92572 AC023355.1-202ENST00000612262 4242 ntTSL 5 BASIC11.87□□□□□ -0.51
AP3S1Q92572 PTPRK-203ENST00000368207 4758 ntTSL 5 BASIC11.87□□□□□ -0.51
AP3S1Q92572 IWS1-201ENST00000295321 2958 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
AP3S1Q92572 DDC-206ENST00000431062 1620 ntTSL 5 BASIC11.87□□□□□ -0.51
AP3S1Q92572 BCDIN3D-AS1-201ENST00000548872 3078 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
AP3S1Q92572 DDC-204ENST00000426377 1700 ntTSL 3 BASIC11.87□□□□□ -0.51
AP3S1Q92572 C3orf56-201ENST00000624688 1740 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
AP3S1Q92572 REXO5-201ENST00000261377 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
AP3S1Q92572 CHST15-202ENST00000435907 4820 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
AP3S1Q92572 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
AP3S1Q92572 ZMAT5-201ENST00000344318 899 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
AP3S1Q92572 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
AP3S1Q92572 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC11.87□□□□□ -0.51
AP3S1Q92572 SMARCB1-203ENST00000407082 1182 ntTSL 5 BASIC11.87□□□□□ -0.51
AP3S1Q92572 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
AP3S1Q92572 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC11.87□□□□□ -0.51
AP3S1Q92572 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC11.87□□□□□ -0.51
AP3S1Q92572 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC11.87□□□□□ -0.51
AP3S1Q92572 TMPRSS11CP-201ENST00000453277 683 ntBASIC11.87□□□□□ -0.51
AP3S1Q92572 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
AP3S1Q92572 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC11.87□□□□□ -0.51
AP3S1Q92572 AC106760.1-201ENST00000508690 800 ntBASIC11.87□□□□□ -0.51
AP3S1Q92572 TDH-203ENST00000531764 1110 ntBASIC11.87□□□□□ -0.51
AP3S1Q92572 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
AP3S1Q92572 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC11.87□□□□□ -0.51
AP3S1Q92572 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
AP3S1Q92572 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC11.87□□□□□ -0.51
AP3S1Q92572 RN7SL455P-201ENST00000580629 282 ntBASIC11.87□□□□□ -0.51
AP3S1Q92572 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
AP3S1Q92572 AC093028.1-201ENST00000622998 982 ntBASIC11.87□□□□□ -0.51
AP3S1Q92572 AL033527.5-201ENST00000641382 801 ntBASIC11.87□□□□□ -0.51
AP3S1Q92572 AC134684.3-201ENST00000641758 218 ntBASIC11.87□□□□□ -0.51
AP3S1Q92572 KLK2-202ENST00000358049 2847 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
AP3S1Q92572 ZNF630-206ENST00000442455 2829 ntAPPRIS P2 TSL 4 BASIC11.87□□□□□ -0.51
AP3S1Q92572 RBM33-207ENST00000401878 10149 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
AP3S1Q92572 TSPEAR-204ENST00000614657 4027 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
AP3S1Q92572 RFX5-202ENST00000368870 2459 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
AP3S1Q92572 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
AP3S1Q92572 PAK1-215ENST00000530617 3001 ntTSL 2 BASIC11.87□□□□□ -0.51
AP3S1Q92572 TMPO-212ENST00000556029 4242 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
AP3S1Q92572 TESPA1-202ENST00000449076 2010 ntAPPRIS P3 TSL 2 BASIC11.87□□□□□ -0.51
AP3S1Q92572 TMEM170A-201ENST00000357613 4959 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
AP3S1Q92572 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
AP3S1Q92572 PMEPA1-205ENST00000395816 4519 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
AP3S1Q92572 FHOD1-201ENST00000258201 3990 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
AP3S1Q92572 TRO-201ENST00000173898 4647 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
AP3S1Q92572 SYBU-203ENST00000408889 2776 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
AP3S1Q92572 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC11.87□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms