Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 AL592295.4-201ENST00000636161 997 ntTSL 4 BASIC11.86□□□□□ -0.51
NPIPB4C9JG80 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC11.86□□□□□ -0.51
NPIPB4C9JG80 RNF113A-201ENST00000371442 1353 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
NPIPB4C9JG80 ATP6V1C1-205ENST00000521514 1484 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
NPIPB4C9JG80 TMUB2-205ENST00000587172 1598 ntTSL 2 BASIC11.86□□□□□ -0.51
NPIPB4C9JG80 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
NPIPB4C9JG80 PECR-201ENST00000265322 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
NPIPB4C9JG80 ZNF410-201ENST00000324593 2293 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
NPIPB4C9JG80 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC11.86□□□□□ -0.51
NPIPB4C9JG80 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
NPIPB4C9JG80 FPGT-202ENST00000370898 3254 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
NPIPB4C9JG80 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
NPIPB4C9JG80 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
NPIPB4C9JG80 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
NPIPB4C9JG80 SEC24B-202ENST00000399100 3780 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
NPIPB4C9JG80 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
NPIPB4C9JG80 CT62-203ENST00000566432 2822 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
NPIPB4C9JG80 LIN28B-203ENST00000637759 2635 ntTSL 5 BASIC11.86□□□□□ -0.51
NPIPB4C9JG80 CICP1-201ENST00000416803 2410 ntBASIC11.86□□□□□ -0.51
NPIPB4C9JG80 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC11.86□□□□□ -0.51
NPIPB4C9JG80 ZWILCH-209ENST00000565627 1845 ntTSL 2 BASIC11.86□□□□□ -0.51
NPIPB4C9JG80 VRK3-209ENST00000594948 1847 ntAPPRIS P3 TSL 2 BASIC11.86□□□□□ -0.51
NPIPB4C9JG80 COPS7A-201ENST00000229251 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
NPIPB4C9JG80 AS3MT-202ENST00000615257 1723 ntTSL 5 BASIC11.86□□□□□ -0.51
NPIPB4C9JG80 DTX2P1-201ENST00000425797 1633 ntBASIC11.86□□□□□ -0.51
NPIPB4C9JG80 AL157832.2-205ENST00000597245 1649 ntBASIC11.86□□□□□ -0.51
NPIPB4C9JG80 KCTD21-AS1-207ENST00000600795 1549 ntBASIC11.86□□□□□ -0.51
NPIPB4C9JG80 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC11.85□□□□□ -0.51
NPIPB4C9JG80 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC11.85□□□□□ -0.51
NPIPB4C9JG80 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC11.85□□□□□ -0.51
NPIPB4C9JG80 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
NPIPB4C9JG80 NECTIN2-201ENST00000252483 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
NPIPB4C9JG80 HEY2-202ENST00000368365 2461 ntTSL 2 BASIC11.85□□□□□ -0.51
NPIPB4C9JG80 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
NPIPB4C9JG80 AC124319.4-201ENST00000622931 2161 ntBASIC11.85□□□□□ -0.51
NPIPB4C9JG80 ECM1-202ENST00000369047 2070 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
NPIPB4C9JG80 RNF34-203ENST00000392465 2051 ntAPPRIS P3 TSL 5 BASIC11.85□□□□□ -0.51
NPIPB4C9JG80 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
NPIPB4C9JG80 AC136604.2-201ENST00000500262 1966 ntTSL 2 BASIC11.85□□□□□ -0.51
NPIPB4C9JG80 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC11.85□□□□□ -0.51
NPIPB4C9JG80 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
NPIPB4C9JG80 TNRC18P1-201ENST00000502875 3650 ntBASIC11.85□□□□□ -0.51
NPIPB4C9JG80 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
NPIPB4C9JG80 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
NPIPB4C9JG80 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
NPIPB4C9JG80 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC11.85□□□□□ -0.51
NPIPB4C9JG80 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
NPIPB4C9JG80 TOMM5-203ENST00000401811 789 ntTSL 2 BASIC11.85□□□□□ -0.51
NPIPB4C9JG80 OR2T32P-201ENST00000403423 963 ntBASIC11.85□□□□□ -0.51
NPIPB4C9JG80 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
NPIPB4C9JG80 SDCBP2P1-201ENST00000416115 614 ntBASIC11.85□□□□□ -0.51
NPIPB4C9JG80 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC11.85□□□□□ -0.51
NPIPB4C9JG80 IGHV3-43-201ENST00000434710 434 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
NPIPB4C9JG80 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC11.85□□□□□ -0.51
NPIPB4C9JG80 RPL7P35-201ENST00000446943 740 ntBASIC11.85□□□□□ -0.51
NPIPB4C9JG80 FTLP1-201ENST00000449155 526 ntBASIC11.85□□□□□ -0.51
NPIPB4C9JG80 MTHFD2P7-201ENST00000483867 983 ntBASIC11.85□□□□□ -0.51
NPIPB4C9JG80 AK2-208ENST00000487289 920 ntTSL 2 BASIC11.85□□□□□ -0.51
NPIPB4C9JG80 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
NPIPB4C9JG80 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC11.85□□□□□ -0.51
NPIPB4C9JG80 TOB1-AS1-202ENST00000514358 690 ntTSL 5 BASIC11.85□□□□□ -0.51
NPIPB4C9JG80 LY6E-208ENST00000520531 490 ntTSL 2 BASIC11.85□□□□□ -0.51
NPIPB4C9JG80 AC131009.2-201ENST00000542763 770 ntTSL 3 BASIC11.85□□□□□ -0.51
NPIPB4C9JG80 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC11.85□□□□□ -0.51
NPIPB4C9JG80 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC11.85□□□□□ -0.51
NPIPB4C9JG80 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC11.85□□□□□ -0.51
NPIPB4C9JG80 OVOL3-201ENST00000585332 695 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
NPIPB4C9JG80 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
NPIPB4C9JG80 GMFG-206ENST00000597595 758 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
NPIPB4C9JG80 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC11.85□□□□□ -0.51
NPIPB4C9JG80 AC011247.3-201ENST00000603297 438 ntBASIC11.85□□□□□ -0.51
NPIPB4C9JG80 TBC1D3F-201ENST00000620210 2117 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
NPIPB4C9JG80 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
NPIPB4C9JG80 AC022098.1-201ENST00000588387 2861 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
NPIPB4C9JG80 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
NPIPB4C9JG80 FAM86JP-201ENST00000467239 1910 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
NPIPB4C9JG80 LOXHD1-204ENST00000398705 1824 ntTSL 2 BASIC11.85□□□□□ -0.51
NPIPB4C9JG80 RUSC1-AS1-202ENST00000446880 1836 ntTSL 2 BASIC11.85□□□□□ -0.51
NPIPB4C9JG80 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
NPIPB4C9JG80 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
NPIPB4C9JG80 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
NPIPB4C9JG80 PRIMPOL-201ENST00000314970 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
NPIPB4C9JG80 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
NPIPB4C9JG80 RORC-201ENST00000318247 2180 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
NPIPB4C9JG80 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
NPIPB4C9JG80 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
NPIPB4C9JG80 PIGC-202ENST00000367728 2630 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
NPIPB4C9JG80 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
NPIPB4C9JG80 KIAA0391-211ENST00000605870 1406 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
NPIPB4C9JG80 PICART1-201ENST00000499842 2533 ntTSL 2 BASIC11.85□□□□□ -0.51
NPIPB4C9JG80 SLC16A2-201ENST00000587091 4161 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
NPIPB4C9JG80 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
NPIPB4C9JG80 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC11.85□□□□□ -0.51
NPIPB4C9JG80 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
NPIPB4C9JG80 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
NPIPB4C9JG80 TTC26-207ENST00000478836 1794 ntTSL 2 BASIC11.84□□□□□ -0.51
NPIPB4C9JG80 GOSR2-233ENST00000640068 3103 ntTSL 5 BASIC11.84□□□□□ -0.51
NPIPB4C9JG80 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC11.84□□□□□ -0.51
NPIPB4C9JG80 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
NPIPB4C9JG80 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms