Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 SRPK2P-201ENST00000523408 1100 ntBASIC13.62□□□□□ -0.23
KDELR3O43731 IGHVII-33-1-201ENST00000524010 280 ntBASIC13.62□□□□□ -0.23
KDELR3O43731 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC13.62□□□□□ -0.23
KDELR3O43731 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC13.62□□□□□ -0.23
KDELR3O43731 AC010632.2-201ENST00000588369 1224 ntBASIC13.62□□□□□ -0.23
KDELR3O43731 AC003070.1-201ENST00000592389 457 ntTSL 2 BASIC13.62□□□□□ -0.23
KDELR3O43731 RHOH-219ENST00000614836 2114 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
KDELR3O43731 Metazoa_SRP.153-201ENST00000620153 341 ntBASIC13.62□□□□□ -0.23
KDELR3O43731 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC13.62□□□□□ -0.23
KDELR3O43731 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC13.62□□□□□ -0.23
KDELR3O43731 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC13.62□□□□□ -0.23
KDELR3O43731 GSTT2-203ENST00000634759 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
KDELR3O43731 AP000769.1-203ENST00000637245 208 ntBASIC13.62□□□□□ -0.23
KDELR3O43731 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC13.62□□□□□ -0.23
KDELR3O43731 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
KDELR3O43731 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
KDELR3O43731 NDRG2-201ENST00000298684 1784 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
KDELR3O43731 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
KDELR3O43731 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
KDELR3O43731 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
KDELR3O43731 ZDHHC8P1-202ENST00000418264 1403 ntBASIC13.62□□□□□ -0.23
KDELR3O43731 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
KDELR3O43731 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
KDELR3O43731 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
KDELR3O43731 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC13.62□□□□□ -0.23
KDELR3O43731 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
KDELR3O43731 ACKR1-202ENST00000368122 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
KDELR3O43731 ZDHHC11-201ENST00000283441 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
KDELR3O43731 STK16-202ENST00000409260 1493 ntTSL 5 BASIC13.61□□□□□ -0.23
KDELR3O43731 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
KDELR3O43731 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
KDELR3O43731 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
KDELR3O43731 AL157832.2-205ENST00000597245 1649 ntBASIC13.61□□□□□ -0.23
KDELR3O43731 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
KDELR3O43731 AC138969.2-201ENST00000532739 9932 ntBASIC13.61□□□□□ -0.23
KDELR3O43731 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
KDELR3O43731 SLC39A11-201ENST00000255559 2737 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
KDELR3O43731 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
KDELR3O43731 GOSR2-233ENST00000640068 3103 ntTSL 5 BASIC13.61□□□□□ -0.23
KDELR3O43731 LINC01623-201ENST00000440244 2458 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
KDELR3O43731 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
KDELR3O43731 ARF4-201ENST00000303436 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
KDELR3O43731 HIGD2A-201ENST00000274787 668 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
KDELR3O43731 C6orf48-202ENST00000375635 610 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
KDELR3O43731 SH3BGR-202ENST00000380631 780 ntTSL 5 BASIC13.61□□□□□ -0.23
KDELR3O43731 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC13.61□□□□□ -0.23
KDELR3O43731 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC13.61□□□□□ -0.23
KDELR3O43731 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC13.61□□□□□ -0.23
KDELR3O43731 C6orf48-209ENST00000395789 952 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
KDELR3O43731 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC13.61□□□□□ -0.23
KDELR3O43731 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC13.61□□□□□ -0.23
KDELR3O43731 ARHGEF26-AS1-203ENST00000480639 582 ntTSL 2 BASIC13.61□□□□□ -0.23
KDELR3O43731 CXXC1P1-202ENST00000489409 1212 ntBASIC13.61□□□□□ -0.23
KDELR3O43731 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
KDELR3O43731 PRDM2-213ENST00000503842 705 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
KDELR3O43731 SMUG1-221ENST00000514196 553 ntTSL 4 BASIC13.61□□□□□ -0.23
KDELR3O43731 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC13.61□□□□□ -0.23
KDELR3O43731 AC078814.4-201ENST00000546650 327 ntBASIC13.61□□□□□ -0.23
KDELR3O43731 AC055811.3-201ENST00000584952 686 ntBASIC13.61□□□□□ -0.23
KDELR3O43731 CYP4F36P-201ENST00000589193 186 ntBASIC13.61□□□□□ -0.23
KDELR3O43731 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC13.61□□□□□ -0.23
KDELR3O43731 GMFG-206ENST00000597595 758 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
KDELR3O43731 NEAT1-204ENST00000612303 572 ntTSL 3 BASIC13.61□□□□□ -0.23
KDELR3O43731 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
KDELR3O43731 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
KDELR3O43731 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC13.61□□□□□ -0.23
KDELR3O43731 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC13.61□□□□□ -0.23
KDELR3O43731 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
KDELR3O43731 PROZ-201ENST00000342783 1551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
KDELR3O43731 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
KDELR3O43731 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
KDELR3O43731 SFTPA1-203ENST00000428376 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
KDELR3O43731 POLL-202ENST00000339310 2289 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
KDELR3O43731 ZFHX4-AS1-201ENST00000518143 1711 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
KDELR3O43731 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
KDELR3O43731 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
KDELR3O43731 STT3A-211ENST00000529196 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
KDELR3O43731 AL450468.2-201ENST00000565955 1889 ntBASIC13.61□□□□□ -0.23
KDELR3O43731 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
KDELR3O43731 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
KDELR3O43731 TRPV1-201ENST00000310522 2340 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
KDELR3O43731 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
KDELR3O43731 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
KDELR3O43731 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
KDELR3O43731 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
KDELR3O43731 GHET1-201ENST00000627071 1906 ntBASIC13.6□□□□□ -0.23
KDELR3O43731 FAM13B-203ENST00000425075 3098 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
KDELR3O43731 AL591806.3-201ENST00000289779 2096 ntAPPRIS P5 TSL 2 BASIC13.6□□□□□ -0.23
KDELR3O43731 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
KDELR3O43731 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
KDELR3O43731 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
KDELR3O43731 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
KDELR3O43731 AL355336.1-201ENST00000451355 1676 ntTSL 2 BASIC13.6□□□□□ -0.23
KDELR3O43731 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
KDELR3O43731 BISPR-204ENST00000634675 1806 ntTSL 2 BASIC13.6□□□□□ -0.23
KDELR3O43731 AP000229.1-201ENST00000608591 1979 ntTSL 4 BASIC13.6□□□□□ -0.23
KDELR3O43731 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
KDELR3O43731 BIVM-202ENST00000448849 3198 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
KDELR3O43731 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC13.6□□□□□ -0.23
KDELR3O43731 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms