Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 LGALS14-202ENST00000392052 774 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
RIMBP3Q9UFD9 U2AF1L4-203ENST00000412391 904 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
RIMBP3Q9UFD9 LINC01135-201ENST00000419531 996 ntTSL 4 BASIC20.16■□□□□ 0.82
RIMBP3Q9UFD9 AC023347.1-201ENST00000435352 604 ntTSL 4 BASIC20.16■□□□□ 0.82
RIMBP3Q9UFD9 TEX51-204ENST00000450035 736 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
RIMBP3Q9UFD9 Z97205.1-201ENST00000451328 448 ntTSL 2 BASIC20.16■□□□□ 0.82
RIMBP3Q9UFD9 RN7SL658P-201ENST00000463595 303 ntBASIC20.16■□□□□ 0.82
RIMBP3Q9UFD9 RPSAP4-201ENST00000488229 888 ntBASIC20.16■□□□□ 0.82
RIMBP3Q9UFD9 AP001972.2-201ENST00000529304 216 ntTSL 5 BASIC20.16■□□□□ 0.82
RIMBP3Q9UFD9 AP001972.4-201ENST00000530550 560 ntTSL 4 BASIC20.16■□□□□ 0.82
RIMBP3Q9UFD9 AC024575.1-201ENST00000590399 682 ntTSL 5 BASIC20.16■□□□□ 0.82
RIMBP3Q9UFD9 TEX28-201ENST00000610938 1233 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
RIMBP3Q9UFD9 TRAPPC2L-215ENST00000625770 281 ntTSL 2 BASIC20.16■□□□□ 0.82
RIMBP3Q9UFD9 5_8S_rRNA.4-201ENST00000636054 151 ntBASIC20.16■□□□□ 0.82
RIMBP3Q9UFD9 AL592295.4-201ENST00000636161 997 ntTSL 4 BASIC20.16■□□□□ 0.82
RIMBP3Q9UFD9 SERPING1-203ENST00000378323 1733 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
RIMBP3Q9UFD9 LRRC6-203ENST00000518642 1674 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RIMBP3Q9UFD9 RMND5B-212ENST00000542098 1681 ntTSL 5 BASIC20.16■□□□□ 0.82
RIMBP3Q9UFD9 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RIMBP3Q9UFD9 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RIMBP3Q9UFD9 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
RIMBP3Q9UFD9 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RIMBP3Q9UFD9 ADPRH-202ENST00000465513 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RIMBP3Q9UFD9 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RIMBP3Q9UFD9 FTLP10-201ENST00000503647 1501 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RIMBP3Q9UFD9 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RIMBP3Q9UFD9 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RIMBP3Q9UFD9 NCR3-203ENST00000376072 875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
RIMBP3Q9UFD9 HLA-DRA-202ENST00000395388 1280 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
RIMBP3Q9UFD9 AC104772.2-201ENST00000412747 613 ntBASIC20.16■□□□□ 0.82
RIMBP3Q9UFD9 HSPB1-202ENST00000429938 527 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RIMBP3Q9UFD9 SLC25A5P5-201ENST00000435239 897 ntBASIC20.16■□□□□ 0.82
RIMBP3Q9UFD9 USP41-202ENST00000454608 1077 ntAPPRIS P5 TSL 5 BASIC20.16■□□□□ 0.82
RIMBP3Q9UFD9 RN7SL801P-201ENST00000479462 302 ntBASIC20.16■□□□□ 0.82
RIMBP3Q9UFD9 ELMOD2-206ENST00000511887 751 ntTSL 4 BASIC20.16■□□□□ 0.82
RIMBP3Q9UFD9 GUSBP3-202ENST00000513408 1296 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RIMBP3Q9UFD9 AC015743.1-201ENST00000524123 795 ntBASIC20.16■□□□□ 0.82
RIMBP3Q9UFD9 AC023078.7-201ENST00000532712 961 ntBASIC20.16■□□□□ 0.82
RIMBP3Q9UFD9 OLR1-211ENST00000545927 1008 ntTSL 2 BASIC20.16■□□□□ 0.82
RIMBP3Q9UFD9 AC126177.1-202ENST00000548419 973 ntBASIC20.16■□□□□ 0.82
RIMBP3Q9UFD9 AC012317.1-201ENST00000563611 534 ntTSL 4 BASIC20.16■□□□□ 0.82
RIMBP3Q9UFD9 LINC02256-202ENST00000564670 543 ntTSL 4 BASIC20.16■□□□□ 0.82
RIMBP3Q9UFD9 NRSN2-205ENST00000608467 504 ntTSL 5 BASIC20.16■□□□□ 0.82
RIMBP3Q9UFD9 AC008013.1-201ENST00000612219 629 ntBASIC20.16■□□□□ 0.82
RIMBP3Q9UFD9 AC113385.3-201ENST00000621479 747 ntBASIC20.16■□□□□ 0.82
RIMBP3Q9UFD9 RBMX2-205ENST00000639890 871 ntTSL 5 BASIC20.16■□□□□ 0.82
RIMBP3Q9UFD9 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RIMBP3Q9UFD9 AC009927.1-201ENST00000510501 1779 ntBASIC20.15■□□□□ 0.82
RIMBP3Q9UFD9 LINC01532-202ENST00000591143 1948 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RIMBP3Q9UFD9 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC20.15■□□□□ 0.82
RIMBP3Q9UFD9 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RIMBP3Q9UFD9 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RIMBP3Q9UFD9 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RIMBP3Q9UFD9 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RIMBP3Q9UFD9 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RIMBP3Q9UFD9 LST1-201ENST00000211921 504 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RIMBP3Q9UFD9 RNU4-8P-201ENST00000364936 141 ntBASIC20.15■□□□□ 0.82
RIMBP3Q9UFD9 AL591503.3-201ENST00000423038 635 ntBASIC20.15■□□□□ 0.82
RIMBP3Q9UFD9 GOT2P3-201ENST00000426641 1289 ntBASIC20.15■□□□□ 0.82
RIMBP3Q9UFD9 LINC01079-201ENST00000431171 580 ntTSL 2 BASIC20.15■□□□□ 0.82
RIMBP3Q9UFD9 CALN1-205ENST00000431984 777 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
RIMBP3Q9UFD9 NEURL1-AS1-202ENST00000453753 640 ntTSL 5 BASIC20.15■□□□□ 0.82
RIMBP3Q9UFD9 AC007849.2-201ENST00000484597 471 ntBASIC20.15■□□□□ 0.82
RIMBP3Q9UFD9 UBE2D3-211ENST00000502404 574 ntTSL 4 BASIC20.15■□□□□ 0.82
RIMBP3Q9UFD9 UBE2D3-219ENST00000505207 527 ntTSL 5 BASIC20.15■□□□□ 0.82
RIMBP3Q9UFD9 AC026785.1-201ENST00000505520 580 ntBASIC20.15■□□□□ 0.82
RIMBP3Q9UFD9 AC064807.3-201ENST00000523810 470 ntTSL 2 BASIC20.15■□□□□ 0.82
RIMBP3Q9UFD9 AC011603.2-201ENST00000548149 675 ntTSL 3 BASIC20.15■□□□□ 0.82
RIMBP3Q9UFD9 RNF41-211ENST00000552656 1193 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RIMBP3Q9UFD9 NT5CP1-201ENST00000554092 509 ntBASIC20.15■□□□□ 0.82
RIMBP3Q9UFD9 AC011773.4-201ENST00000562577 487 ntTSL 2 BASIC20.15■□□□□ 0.82
RIMBP3Q9UFD9 CNFN-202ENST00000597255 502 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RIMBP3Q9UFD9 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RIMBP3Q9UFD9 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RIMBP3Q9UFD9 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RIMBP3Q9UFD9 CD1C-201ENST00000368170 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RIMBP3Q9UFD9 MECR-202ENST00000373791 2416 ntTSL 2 BASIC20.15■□□□□ 0.82
RIMBP3Q9UFD9 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC20.15■□□□□ 0.82
RIMBP3Q9UFD9 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
RIMBP3Q9UFD9 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.82
RIMBP3Q9UFD9 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
RIMBP3Q9UFD9 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
RIMBP3Q9UFD9 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC20.14■□□□□ 0.82
RIMBP3Q9UFD9 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC20.14■□□□□ 0.82
RIMBP3Q9UFD9 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
RIMBP3Q9UFD9 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
RIMBP3Q9UFD9 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
RIMBP3Q9UFD9 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RIMBP3Q9UFD9 GH1-201ENST00000323322 803 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RIMBP3Q9UFD9 KLK13-202ENST00000335422 378 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RIMBP3Q9UFD9 TP53TG3B-201ENST00000341305 2034 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
RIMBP3Q9UFD9 GH1-202ENST00000342364 537 ntTSL 5 BASIC20.14■□□□□ 0.81
RIMBP3Q9UFD9 AC017104.3-201ENST00000370380 568 ntTSL 4 BASIC20.14■□□□□ 0.81
RIMBP3Q9UFD9 CNIH1-202ENST00000395573 1233 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RIMBP3Q9UFD9 DLEC1P1-201ENST00000427139 576 ntBASIC20.14■□□□□ 0.81
RIMBP3Q9UFD9 AC079355.2-201ENST00000440057 190 ntBASIC20.14■□□□□ 0.81
RIMBP3Q9UFD9 AC009245.1-201ENST00000456481 862 ntBASIC20.14■□□□□ 0.81
RIMBP3Q9UFD9 AC245595.1-202ENST00000457390 425 ntTSL 5 BASIC20.14■□□□□ 0.81
RIMBP3Q9UFD9 GH1-204ENST00000458650 756 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RIMBP3Q9UFD9 HNRNPA3P8-201ENST00000474219 974 ntBASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms