Protein–RNA interactions for Protein: Q9Y6X0

SETBP1, SET-binding protein, humanhuman

Predictions only

Length 1,596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SETBP1Q9Y6X0 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
SETBP1Q9Y6X0 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
SETBP1Q9Y6X0 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC31.9■■■□□ 2.7
SETBP1Q9Y6X0 AC020928.2-201ENST00000588717 2197 ntBASIC31.9■■■□□ 2.7
SETBP1Q9Y6X0 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
SETBP1Q9Y6X0 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
SETBP1Q9Y6X0 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
SETBP1Q9Y6X0 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
SETBP1Q9Y6X0 AC006015.1-201ENST00000429970 570 ntBASIC31.9■■■□□ 2.7
SETBP1Q9Y6X0 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
SETBP1Q9Y6X0 AP005435.1-201ENST00000529293 1178 ntBASIC31.9■■■□□ 2.7
SETBP1Q9Y6X0 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC31.89■■■□□ 2.7
SETBP1Q9Y6X0 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC31.89■■■□□ 2.7
SETBP1Q9Y6X0 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
SETBP1Q9Y6X0 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC31.89■■■□□ 2.7
SETBP1Q9Y6X0 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC31.89■■■□□ 2.7
SETBP1Q9Y6X0 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC31.89■■■□□ 2.7
SETBP1Q9Y6X0 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC31.89■■■□□ 2.7
SETBP1Q9Y6X0 GXYLT1P2-201ENST00000433312 1230 ntBASIC31.89■■■□□ 2.7
SETBP1Q9Y6X0 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC31.89■■■□□ 2.7
SETBP1Q9Y6X0 DUX4L4-201ENST00000566884 1269 ntBASIC31.89■■■□□ 2.7
SETBP1Q9Y6X0 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
SETBP1Q9Y6X0 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
SETBP1Q9Y6X0 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
SETBP1Q9Y6X0 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
SETBP1Q9Y6X0 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
SETBP1Q9Y6X0 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC31.88■■■□□ 2.69
SETBP1Q9Y6X0 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC31.88■■■□□ 2.69
SETBP1Q9Y6X0 HLA-L-209ENST00000420110 1011 ntBASIC31.88■■■□□ 2.69
SETBP1Q9Y6X0 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC31.88■■■□□ 2.69
SETBP1Q9Y6X0 MPST-204ENST00000404393 1329 ntTSL 5 BASIC31.88■■■□□ 2.69
SETBP1Q9Y6X0 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC31.87■■■□□ 2.69
SETBP1Q9Y6X0 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
SETBP1Q9Y6X0 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC31.87■■■□□ 2.69
SETBP1Q9Y6X0 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
SETBP1Q9Y6X0 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC31.87■■■□□ 2.69
SETBP1Q9Y6X0 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC31.87■■■□□ 2.69
SETBP1Q9Y6X0 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
SETBP1Q9Y6X0 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC31.86■■■□□ 2.69
SETBP1Q9Y6X0 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC31.86■■■□□ 2.69
SETBP1Q9Y6X0 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC31.86■■■□□ 2.69
SETBP1Q9Y6X0 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
SETBP1Q9Y6X0 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
SETBP1Q9Y6X0 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
SETBP1Q9Y6X0 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC31.86■■■□□ 2.69
SETBP1Q9Y6X0 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
SETBP1Q9Y6X0 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
SETBP1Q9Y6X0 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC31.86■■■□□ 2.69
SETBP1Q9Y6X0 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
SETBP1Q9Y6X0 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC31.85■■■□□ 2.69
SETBP1Q9Y6X0 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC31.85■■■□□ 2.69
SETBP1Q9Y6X0 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
SETBP1Q9Y6X0 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC31.85■■■□□ 2.69
SETBP1Q9Y6X0 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC31.85■■■□□ 2.69
SETBP1Q9Y6X0 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
SETBP1Q9Y6X0 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC31.85■■■□□ 2.69
SETBP1Q9Y6X0 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
SETBP1Q9Y6X0 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
SETBP1Q9Y6X0 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC31.85■■■□□ 2.69
SETBP1Q9Y6X0 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
SETBP1Q9Y6X0 AC135731.1-201ENST00000569415 2548 ntBASIC31.84■■■□□ 2.69
SETBP1Q9Y6X0 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
SETBP1Q9Y6X0 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
SETBP1Q9Y6X0 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC31.84■■■□□ 2.69
SETBP1Q9Y6X0 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC31.84■■■□□ 2.69
SETBP1Q9Y6X0 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC31.84■■■□□ 2.69
SETBP1Q9Y6X0 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC31.84■■■□□ 2.69
SETBP1Q9Y6X0 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC31.84■■■□□ 2.69
SETBP1Q9Y6X0 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
SETBP1Q9Y6X0 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC31.83■■■□□ 2.69
SETBP1Q9Y6X0 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
SETBP1Q9Y6X0 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC31.83■■■□□ 2.69
SETBP1Q9Y6X0 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC31.83■■■□□ 2.69
SETBP1Q9Y6X0 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC31.83■■■□□ 2.69
SETBP1Q9Y6X0 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.69
SETBP1Q9Y6X0 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
SETBP1Q9Y6X0 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
SETBP1Q9Y6X0 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC31.82■■■□□ 2.68
SETBP1Q9Y6X0 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC31.81■■■□□ 2.68
SETBP1Q9Y6X0 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC31.81■■■□□ 2.68
SETBP1Q9Y6X0 FP325331.1-202ENST00000623531 1380 ntBASIC31.81■■■□□ 2.68
SETBP1Q9Y6X0 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
SETBP1Q9Y6X0 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC31.81■■■□□ 2.68
SETBP1Q9Y6X0 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC31.81■■■□□ 2.68
SETBP1Q9Y6X0 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
SETBP1Q9Y6X0 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC31.81■■■□□ 2.68
SETBP1Q9Y6X0 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
SETBP1Q9Y6X0 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
SETBP1Q9Y6X0 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
SETBP1Q9Y6X0 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC31.81■■■□□ 2.68
SETBP1Q9Y6X0 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC31.81■■■□□ 2.68
SETBP1Q9Y6X0 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
SETBP1Q9Y6X0 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
SETBP1Q9Y6X0 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC31.8■■■□□ 2.68
SETBP1Q9Y6X0 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC31.8■■■□□ 2.68
SETBP1Q9Y6X0 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC31.8■■■□□ 2.68
SETBP1Q9Y6X0 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC31.8■■■□□ 2.68
SETBP1Q9Y6X0 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
SETBP1Q9Y6X0 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC31.8■■■□□ 2.68
SETBP1Q9Y6X0 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC31.8■■■□□ 2.68
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms