Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC21■□□□□ 0.95
LHX6Q9UPM6 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21■□□□□ 0.95
LHX6Q9UPM6 AC011767.1-201ENST00000617410 1153 ntBASIC21■□□□□ 0.95
LHX6Q9UPM6 TBCB-214ENST00000629269 413 ntTSL 5 BASIC21■□□□□ 0.95
LHX6Q9UPM6 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21■□□□□ 0.95
LHX6Q9UPM6 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LHX6Q9UPM6 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LHX6Q9UPM6 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
LHX6Q9UPM6 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.99■□□□□ 0.95
LHX6Q9UPM6 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LHX6Q9UPM6 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LHX6Q9UPM6 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LHX6Q9UPM6 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LHX6Q9UPM6 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.99■□□□□ 0.95
LHX6Q9UPM6 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.99■□□□□ 0.95
LHX6Q9UPM6 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.99■□□□□ 0.95
LHX6Q9UPM6 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.99■□□□□ 0.95
LHX6Q9UPM6 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.99■□□□□ 0.95
LHX6Q9UPM6 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.99■□□□□ 0.95
LHX6Q9UPM6 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LHX6Q9UPM6 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.99■□□□□ 0.95
LHX6Q9UPM6 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
LHX6Q9UPM6 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
LHX6Q9UPM6 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.98■□□□□ 0.95
LHX6Q9UPM6 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.98■□□□□ 0.95
LHX6Q9UPM6 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.98■□□□□ 0.95
LHX6Q9UPM6 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LHX6Q9UPM6 TSPY6P-201ENST00000448518 926 ntBASIC20.98■□□□□ 0.95
LHX6Q9UPM6 AC083906.2-201ENST00000511578 360 ntBASIC20.98■□□□□ 0.95
LHX6Q9UPM6 ITM2C-210ENST00000620962 501 ntBASIC20.98■□□□□ 0.95
LHX6Q9UPM6 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.98■□□□□ 0.95
LHX6Q9UPM6 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
LHX6Q9UPM6 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.98■□□□□ 0.95
LHX6Q9UPM6 AC131274.2-201ENST00000580697 1507 ntBASIC20.98■□□□□ 0.95
LHX6Q9UPM6 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
LHX6Q9UPM6 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.98■□□□□ 0.95
LHX6Q9UPM6 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
LHX6Q9UPM6 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LHX6Q9UPM6 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.97■□□□□ 0.95
LHX6Q9UPM6 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LHX6Q9UPM6 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
LHX6Q9UPM6 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LHX6Q9UPM6 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
LHX6Q9UPM6 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC20.97■□□□□ 0.95
LHX6Q9UPM6 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LHX6Q9UPM6 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
LHX6Q9UPM6 POU5F1P3-201ENST00000428824 1078 ntBASIC20.97■□□□□ 0.95
LHX6Q9UPM6 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC20.97■□□□□ 0.95
LHX6Q9UPM6 TPRG1LP1-201ENST00000598702 760 ntBASIC20.97■□□□□ 0.95
LHX6Q9UPM6 AP006294.2-201ENST00000641667 209 ntBASIC20.97■□□□□ 0.95
LHX6Q9UPM6 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LHX6Q9UPM6 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.97■□□□□ 0.95
LHX6Q9UPM6 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LHX6Q9UPM6 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LHX6Q9UPM6 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LHX6Q9UPM6 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC20.96■□□□□ 0.95
LHX6Q9UPM6 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
LHX6Q9UPM6 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.96■□□□□ 0.95
LHX6Q9UPM6 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC20.96■□□□□ 0.95
LHX6Q9UPM6 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LHX6Q9UPM6 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.96■□□□□ 0.95
LHX6Q9UPM6 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LHX6Q9UPM6 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
LHX6Q9UPM6 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
LHX6Q9UPM6 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
LHX6Q9UPM6 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LHX6Q9UPM6 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
LHX6Q9UPM6 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.95■□□□□ 0.94
LHX6Q9UPM6 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LHX6Q9UPM6 AC069152.1-201ENST00000438030 544 ntBASIC20.95■□□□□ 0.94
LHX6Q9UPM6 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.95■□□□□ 0.94
LHX6Q9UPM6 AL138781.1-201ENST00000566567 1274 ntBASIC20.95■□□□□ 0.94
LHX6Q9UPM6 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.95■□□□□ 0.94
LHX6Q9UPM6 SMUG1P1-201ENST00000590640 811 ntBASIC20.95■□□□□ 0.94
LHX6Q9UPM6 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LHX6Q9UPM6 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.94■□□□□ 0.94
LHX6Q9UPM6 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
LHX6Q9UPM6 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
LHX6Q9UPM6 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LHX6Q9UPM6 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LHX6Q9UPM6 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.94■□□□□ 0.94
LHX6Q9UPM6 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LHX6Q9UPM6 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.94■□□□□ 0.94
LHX6Q9UPM6 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.94■□□□□ 0.94
LHX6Q9UPM6 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.94■□□□□ 0.94
LHX6Q9UPM6 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LHX6Q9UPM6 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.94■□□□□ 0.94
LHX6Q9UPM6 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
LHX6Q9UPM6 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LHX6Q9UPM6 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
LHX6Q9UPM6 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
LHX6Q9UPM6 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LHX6Q9UPM6 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LHX6Q9UPM6 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.93■□□□□ 0.94
LHX6Q9UPM6 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LHX6Q9UPM6 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LHX6Q9UPM6 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.93■□□□□ 0.94
LHX6Q9UPM6 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
LHX6Q9UPM6 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC20.93■□□□□ 0.94
LHX6Q9UPM6 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms