Protein–RNA interactions for Protein: Q9HBD1

RC3H2, Roquin-2, humanhuman

Known RBP Predictions only

Length 1,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2Q9HBD1 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC24.02■■□□□ 1.44
RC3H2Q9HBD1 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
RC3H2Q9HBD1 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
RC3H2Q9HBD1 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC24.02■■□□□ 1.44
RC3H2Q9HBD1 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
RC3H2Q9HBD1 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC24.02■■□□□ 1.44
RC3H2Q9HBD1 AC105233.4-201ENST00000642045 216 ntBASIC24.02■■□□□ 1.44
RC3H2Q9HBD1 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
RC3H2Q9HBD1 STX4-202ENST00000394998 1498 ntTSL 2 BASIC24.01■■□□□ 1.43
RC3H2Q9HBD1 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC24.01■■□□□ 1.43
RC3H2Q9HBD1 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
RC3H2Q9HBD1 AC006015.1-201ENST00000429970 570 ntBASIC24.01■■□□□ 1.43
RC3H2Q9HBD1 AC144652.1-201ENST00000609974 1624 ntBASIC24.01■■□□□ 1.43
RC3H2Q9HBD1 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
RC3H2Q9HBD1 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
RC3H2Q9HBD1 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
RC3H2Q9HBD1 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RC3H2Q9HBD1 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC24■■□□□ 1.43
RC3H2Q9HBD1 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RC3H2Q9HBD1 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RC3H2Q9HBD1 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC24■■□□□ 1.43
RC3H2Q9HBD1 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC24■■□□□ 1.43
RC3H2Q9HBD1 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC24■■□□□ 1.43
RC3H2Q9HBD1 TPRG1LP1-201ENST00000598702 760 ntBASIC24■■□□□ 1.43
RC3H2Q9HBD1 RAP2CP1-201ENST00000605103 478 ntBASIC24■■□□□ 1.43
RC3H2Q9HBD1 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC24■■□□□ 1.43
RC3H2Q9HBD1 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
RC3H2Q9HBD1 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RC3H2Q9HBD1 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC24■■□□□ 1.43
RC3H2Q9HBD1 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
RC3H2Q9HBD1 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC23.99■■□□□ 1.43
RC3H2Q9HBD1 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC23.99■■□□□ 1.43
RC3H2Q9HBD1 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC23.99■■□□□ 1.43
RC3H2Q9HBD1 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
RC3H2Q9HBD1 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
RC3H2Q9HBD1 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
RC3H2Q9HBD1 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC23.98■■□□□ 1.43
RC3H2Q9HBD1 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC23.98■■□□□ 1.43
RC3H2Q9HBD1 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC23.98■■□□□ 1.43
RC3H2Q9HBD1 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RC3H2Q9HBD1 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC23.98■■□□□ 1.43
RC3H2Q9HBD1 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RC3H2Q9HBD1 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RC3H2Q9HBD1 LINC01529-204ENST00000636474 1715 ntBASIC23.98■■□□□ 1.43
RC3H2Q9HBD1 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RC3H2Q9HBD1 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
RC3H2Q9HBD1 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC23.98■■□□□ 1.43
RC3H2Q9HBD1 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
RC3H2Q9HBD1 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
RC3H2Q9HBD1 HLA-L-209ENST00000420110 1011 ntBASIC23.97■■□□□ 1.43
RC3H2Q9HBD1 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
RC3H2Q9HBD1 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RC3H2Q9HBD1 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
RC3H2Q9HBD1 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
RC3H2Q9HBD1 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RC3H2Q9HBD1 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC23.96■■□□□ 1.43
RC3H2Q9HBD1 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC23.96■■□□□ 1.43
RC3H2Q9HBD1 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC23.96■■□□□ 1.43
RC3H2Q9HBD1 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC23.96■■□□□ 1.43
RC3H2Q9HBD1 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC23.96■■□□□ 1.43
RC3H2Q9HBD1 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RC3H2Q9HBD1 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RC3H2Q9HBD1 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
RC3H2Q9HBD1 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC23.95■■□□□ 1.43
RC3H2Q9HBD1 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.43
RC3H2Q9HBD1 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC23.95■■□□□ 1.43
RC3H2Q9HBD1 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
RC3H2Q9HBD1 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
RC3H2Q9HBD1 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
RC3H2Q9HBD1 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
RC3H2Q9HBD1 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
RC3H2Q9HBD1 MFF-208ENST00000409616 1247 ntTSL 5 BASIC23.95■■□□□ 1.42
RC3H2Q9HBD1 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC23.95■■□□□ 1.42
RC3H2Q9HBD1 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
RC3H2Q9HBD1 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
RC3H2Q9HBD1 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
RC3H2Q9HBD1 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
RC3H2Q9HBD1 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC23.94■■□□□ 1.42
RC3H2Q9HBD1 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC23.94■■□□□ 1.42
RC3H2Q9HBD1 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC23.94■■□□□ 1.42
RC3H2Q9HBD1 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC23.94■■□□□ 1.42
RC3H2Q9HBD1 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC23.94■■□□□ 1.42
RC3H2Q9HBD1 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC23.94■■□□□ 1.42
RC3H2Q9HBD1 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC23.94■■□□□ 1.42
RC3H2Q9HBD1 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
RC3H2Q9HBD1 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
RC3H2Q9HBD1 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
RC3H2Q9HBD1 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC23.93■■□□□ 1.42
RC3H2Q9HBD1 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC23.93■■□□□ 1.42
RC3H2Q9HBD1 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
RC3H2Q9HBD1 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
RC3H2Q9HBD1 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
RC3H2Q9HBD1 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC23.93■■□□□ 1.42
RC3H2Q9HBD1 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC23.93■■□□□ 1.42
RC3H2Q9HBD1 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC23.93■■□□□ 1.42
RC3H2Q9HBD1 AC080038.1-201ENST00000611274 1154 ntBASIC23.93■■□□□ 1.42
RC3H2Q9HBD1 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
RC3H2Q9HBD1 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC23.93■■□□□ 1.42
RC3H2Q9HBD1 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC23.92■■□□□ 1.42
RC3H2Q9HBD1 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms