Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 AL137060.1-201ENST00000618151 2648 ntBASIC21.14■□□□□ 0.98
PIF1Q9H611 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
PIF1Q9H611 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
PIF1Q9H611 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.14■□□□□ 0.97
PIF1Q9H611 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.14■□□□□ 0.97
PIF1Q9H611 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PIF1Q9H611 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PIF1Q9H611 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PIF1Q9H611 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
PIF1Q9H611 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PIF1Q9H611 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PIF1Q9H611 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.13■□□□□ 0.97
PIF1Q9H611 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PIF1Q9H611 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PIF1Q9H611 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
PIF1Q9H611 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PIF1Q9H611 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.13■□□□□ 0.97
PIF1Q9H611 AC139795.1-202ENST00000500444 432 ntBASIC21.13■□□□□ 0.97
PIF1Q9H611 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC21.13■□□□□ 0.97
PIF1Q9H611 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC21.13■□□□□ 0.97
PIF1Q9H611 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
PIF1Q9H611 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
PIF1Q9H611 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.13■□□□□ 0.97
PIF1Q9H611 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PIF1Q9H611 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PIF1Q9H611 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PIF1Q9H611 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
PIF1Q9H611 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
PIF1Q9H611 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
PIF1Q9H611 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PIF1Q9H611 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PIF1Q9H611 AL353803.4-201ENST00000565882 1934 ntBASIC21.12■□□□□ 0.97
PIF1Q9H611 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
PIF1Q9H611 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
PIF1Q9H611 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PIF1Q9H611 ESRRAP2-201ENST00000418437 1549 ntBASIC21.12■□□□□ 0.97
PIF1Q9H611 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PIF1Q9H611 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PIF1Q9H611 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
PIF1Q9H611 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PIF1Q9H611 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.12■□□□□ 0.97
PIF1Q9H611 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PIF1Q9H611 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.11■□□□□ 0.97
PIF1Q9H611 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PIF1Q9H611 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PIF1Q9H611 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PIF1Q9H611 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.11■□□□□ 0.97
PIF1Q9H611 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PIF1Q9H611 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PIF1Q9H611 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PIF1Q9H611 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.11■□□□□ 0.97
PIF1Q9H611 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
PIF1Q9H611 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.1■□□□□ 0.97
PIF1Q9H611 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
PIF1Q9H611 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
PIF1Q9H611 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.1■□□□□ 0.97
PIF1Q9H611 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PIF1Q9H611 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PIF1Q9H611 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
PIF1Q9H611 GUK1-208ENST00000366728 842 ntTSL 2 BASIC21.1■□□□□ 0.97
PIF1Q9H611 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.1■□□□□ 0.97
PIF1Q9H611 AC120024.1-201ENST00000562672 995 ntBASIC21.1■□□□□ 0.97
PIF1Q9H611 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
PIF1Q9H611 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PIF1Q9H611 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PIF1Q9H611 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
PIF1Q9H611 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PIF1Q9H611 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PIF1Q9H611 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
PIF1Q9H611 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
PIF1Q9H611 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PIF1Q9H611 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PIF1Q9H611 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PIF1Q9H611 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC21.09■□□□□ 0.97
PIF1Q9H611 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PIF1Q9H611 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PIF1Q9H611 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
PIF1Q9H611 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
PIF1Q9H611 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
PIF1Q9H611 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PIF1Q9H611 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PIF1Q9H611 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PIF1Q9H611 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
PIF1Q9H611 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PIF1Q9H611 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PIF1Q9H611 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PIF1Q9H611 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.08■□□□□ 0.97
PIF1Q9H611 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.08■□□□□ 0.97
PIF1Q9H611 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
PIF1Q9H611 AC022616.5-201ENST00000518796 181 ntBASIC21.08■□□□□ 0.97
PIF1Q9H611 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.08■□□□□ 0.97
PIF1Q9H611 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC21.08■□□□□ 0.97
PIF1Q9H611 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC21.08■□□□□ 0.97
PIF1Q9H611 AF131216.4-201ENST00000638924 1588 ntBASIC21.08■□□□□ 0.97
PIF1Q9H611 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PIF1Q9H611 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PIF1Q9H611 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
PIF1Q9H611 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
PIF1Q9H611 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PIF1Q9H611 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms