Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
NPAS4Q8IUM7 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC24.11■■□□□ 1.45
NPAS4Q8IUM7 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
NPAS4Q8IUM7 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC24.11■■□□□ 1.45
NPAS4Q8IUM7 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
NPAS4Q8IUM7 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC24.1■■□□□ 1.45
NPAS4Q8IUM7 DLX3-202ENST00000512495 834 ntTSL 2 BASIC24.1■■□□□ 1.45
NPAS4Q8IUM7 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
NPAS4Q8IUM7 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC24.1■■□□□ 1.45
NPAS4Q8IUM7 AC105233.4-201ENST00000642045 216 ntBASIC24.1■■□□□ 1.45
NPAS4Q8IUM7 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC24.1■■□□□ 1.45
NPAS4Q8IUM7 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
NPAS4Q8IUM7 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC24.1■■□□□ 1.45
NPAS4Q8IUM7 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
NPAS4Q8IUM7 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC24.09■■□□□ 1.45
NPAS4Q8IUM7 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC24.09■■□□□ 1.45
NPAS4Q8IUM7 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC24.09■■□□□ 1.45
NPAS4Q8IUM7 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC24.09■■□□□ 1.45
NPAS4Q8IUM7 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC24.09■■□□□ 1.45
NPAS4Q8IUM7 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
NPAS4Q8IUM7 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC24.09■■□□□ 1.45
NPAS4Q8IUM7 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
NPAS4Q8IUM7 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
NPAS4Q8IUM7 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
NPAS4Q8IUM7 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
NPAS4Q8IUM7 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC24.09■■□□□ 1.45
NPAS4Q8IUM7 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC24.09■■□□□ 1.45
NPAS4Q8IUM7 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
NPAS4Q8IUM7 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
NPAS4Q8IUM7 CREM-210ENST00000374721 2020 ntTSL 5 BASIC24.08■■□□□ 1.45
NPAS4Q8IUM7 STX4-202ENST00000394998 1498 ntTSL 2 BASIC24.08■■□□□ 1.45
NPAS4Q8IUM7 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC24.08■■□□□ 1.45
NPAS4Q8IUM7 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC24.08■■□□□ 1.45
NPAS4Q8IUM7 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC24.08■■□□□ 1.45
NPAS4Q8IUM7 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC24.08■■□□□ 1.45
NPAS4Q8IUM7 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
NPAS4Q8IUM7 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
NPAS4Q8IUM7 MED17-227ENST00000640521 2047 ntTSL 5 BASIC24.08■■□□□ 1.44
NPAS4Q8IUM7 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
NPAS4Q8IUM7 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
NPAS4Q8IUM7 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
NPAS4Q8IUM7 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC24.07■■□□□ 1.44
NPAS4Q8IUM7 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
NPAS4Q8IUM7 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
NPAS4Q8IUM7 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
NPAS4Q8IUM7 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
NPAS4Q8IUM7 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
NPAS4Q8IUM7 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
NPAS4Q8IUM7 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
NPAS4Q8IUM7 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
NPAS4Q8IUM7 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC24.06■■□□□ 1.44
NPAS4Q8IUM7 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC24.06■■□□□ 1.44
NPAS4Q8IUM7 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
NPAS4Q8IUM7 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC24.06■■□□□ 1.44
NPAS4Q8IUM7 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
NPAS4Q8IUM7 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC24.05■■□□□ 1.44
NPAS4Q8IUM7 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC24.05■■□□□ 1.44
NPAS4Q8IUM7 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC24.05■■□□□ 1.44
NPAS4Q8IUM7 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC24.05■■□□□ 1.44
NPAS4Q8IUM7 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC24.05■■□□□ 1.44
NPAS4Q8IUM7 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC24.05■■□□□ 1.44
NPAS4Q8IUM7 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
NPAS4Q8IUM7 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
NPAS4Q8IUM7 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
NPAS4Q8IUM7 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC24.04■■□□□ 1.44
NPAS4Q8IUM7 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
NPAS4Q8IUM7 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
NPAS4Q8IUM7 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC24.04■■□□□ 1.44
NPAS4Q8IUM7 VPS53-216ENST00000574029 585 ntTSL 4 BASIC24.04■■□□□ 1.44
NPAS4Q8IUM7 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC24.04■■□□□ 1.44
NPAS4Q8IUM7 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC24.04■■□□□ 1.44
NPAS4Q8IUM7 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC24.04■■□□□ 1.44
NPAS4Q8IUM7 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
NPAS4Q8IUM7 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
NPAS4Q8IUM7 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
NPAS4Q8IUM7 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC24.03■■□□□ 1.44
NPAS4Q8IUM7 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC24.03■■□□□ 1.44
NPAS4Q8IUM7 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC24.03■■□□□ 1.44
NPAS4Q8IUM7 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC24.03■■□□□ 1.44
NPAS4Q8IUM7 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC24.03■■□□□ 1.44
NPAS4Q8IUM7 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
NPAS4Q8IUM7 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
NPAS4Q8IUM7 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
NPAS4Q8IUM7 MFF-208ENST00000409616 1247 ntTSL 5 BASIC24.03■■□□□ 1.44
NPAS4Q8IUM7 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
NPAS4Q8IUM7 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
NPAS4Q8IUM7 EED-207ENST00000528180 1745 ntTSL 5 BASIC24.03■■□□□ 1.44
NPAS4Q8IUM7 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
NPAS4Q8IUM7 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
NPAS4Q8IUM7 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
NPAS4Q8IUM7 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
NPAS4Q8IUM7 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
NPAS4Q8IUM7 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC24.02■■□□□ 1.44
NPAS4Q8IUM7 ME3-201ENST00000323418 1068 ntTSL 5 BASIC24.02■■□□□ 1.44
NPAS4Q8IUM7 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC24.02■■□□□ 1.44
NPAS4Q8IUM7 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC24.02■■□□□ 1.44
NPAS4Q8IUM7 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC24.02■■□□□ 1.44
NPAS4Q8IUM7 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC24.02■■□□□ 1.44
NPAS4Q8IUM7 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC24.02■■□□□ 1.44
NPAS4Q8IUM7 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC24.02■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms