Protein–RNA interactions for Protein: Q86Y39

NDUFA11, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA11Q86Y39 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NDUFA11Q86Y39 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
NDUFA11Q86Y39 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
NDUFA11Q86Y39 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
NDUFA11Q86Y39 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC17.24■□□□□ 0.35
NDUFA11Q86Y39 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC17.24■□□□□ 0.35
NDUFA11Q86Y39 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NDUFA11Q86Y39 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NDUFA11Q86Y39 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NDUFA11Q86Y39 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC17.23■□□□□ 0.35
NDUFA11Q86Y39 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NDUFA11Q86Y39 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
NDUFA11Q86Y39 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NDUFA11Q86Y39 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NDUFA11Q86Y39 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
NDUFA11Q86Y39 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NDUFA11Q86Y39 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NDUFA11Q86Y39 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NDUFA11Q86Y39 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC17.23■□□□□ 0.35
NDUFA11Q86Y39 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NDUFA11Q86Y39 LINC01529-204ENST00000636474 1715 ntBASIC17.23■□□□□ 0.35
NDUFA11Q86Y39 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NDUFA11Q86Y39 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NDUFA11Q86Y39 AC142381.3-201ENST00000568208 1670 ntBASIC17.23■□□□□ 0.35
NDUFA11Q86Y39 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC17.22■□□□□ 0.35
NDUFA11Q86Y39 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC17.22■□□□□ 0.35
NDUFA11Q86Y39 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NDUFA11Q86Y39 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
NDUFA11Q86Y39 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NDUFA11Q86Y39 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NDUFA11Q86Y39 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC17.22■□□□□ 0.35
NDUFA11Q86Y39 KRT18P5-201ENST00000436075 1291 ntBASIC17.22■□□□□ 0.35
NDUFA11Q86Y39 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC17.22■□□□□ 0.35
NDUFA11Q86Y39 AP005435.1-201ENST00000529293 1178 ntBASIC17.22■□□□□ 0.35
NDUFA11Q86Y39 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC17.22■□□□□ 0.35
NDUFA11Q86Y39 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC17.22■□□□□ 0.35
NDUFA11Q86Y39 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NDUFA11Q86Y39 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NDUFA11Q86Y39 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC17.22■□□□□ 0.35
NDUFA11Q86Y39 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
NDUFA11Q86Y39 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC17.22■□□□□ 0.35
NDUFA11Q86Y39 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
NDUFA11Q86Y39 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NDUFA11Q86Y39 AC144652.1-201ENST00000609974 1624 ntBASIC17.21■□□□□ 0.35
NDUFA11Q86Y39 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NDUFA11Q86Y39 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
NDUFA11Q86Y39 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC17.21■□□□□ 0.35
NDUFA11Q86Y39 HACD1-201ENST00000326961 773 ntTSL 2 BASIC17.21■□□□□ 0.35
NDUFA11Q86Y39 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NDUFA11Q86Y39 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC17.21■□□□□ 0.35
NDUFA11Q86Y39 AL137784.2-201ENST00000607332 1000 ntBASIC17.21■□□□□ 0.35
NDUFA11Q86Y39 MIR6084-201ENST00000622012 110 ntBASIC17.21■□□□□ 0.35
NDUFA11Q86Y39 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
NDUFA11Q86Y39 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NDUFA11Q86Y39 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
NDUFA11Q86Y39 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
NDUFA11Q86Y39 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NDUFA11Q86Y39 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NDUFA11Q86Y39 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NDUFA11Q86Y39 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NDUFA11Q86Y39 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
NDUFA11Q86Y39 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
NDUFA11Q86Y39 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NDUFA11Q86Y39 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NDUFA11Q86Y39 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
NDUFA11Q86Y39 LHPP-203ENST00000392757 840 ntTSL 3 BASIC17.2■□□□□ 0.34
NDUFA11Q86Y39 DUX4L2-201ENST00000561772 1275 ntBASIC17.2■□□□□ 0.34
NDUFA11Q86Y39 AC010525.1-201ENST00000585559 441 ntBASIC17.2■□□□□ 0.34
NDUFA11Q86Y39 AC022517.1-201ENST00000592429 346 ntBASIC17.2■□□□□ 0.34
NDUFA11Q86Y39 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC17.2■□□□□ 0.34
NDUFA11Q86Y39 DUX4L6-201ENST00000626483 1275 ntBASIC17.2■□□□□ 0.34
NDUFA11Q86Y39 DUX4L1-201ENST00000627662 1275 ntBASIC17.2■□□□□ 0.34
NDUFA11Q86Y39 DUX4L8-201ENST00000629013 1275 ntBASIC17.2■□□□□ 0.34
NDUFA11Q86Y39 DUX4L3-201ENST00000630187 1275 ntBASIC17.2■□□□□ 0.34
NDUFA11Q86Y39 DUX4L7-201ENST00000630678 1275 ntBASIC17.2■□□□□ 0.34
NDUFA11Q86Y39 DUX4L5-201ENST00000630834 1275 ntBASIC17.2■□□□□ 0.34
NDUFA11Q86Y39 AL031602.1-201ENST00000633169 911 ntBASIC17.2■□□□□ 0.34
NDUFA11Q86Y39 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC17.2■□□□□ 0.34
NDUFA11Q86Y39 EI24-213ENST00000618552 1747 ntTSL 5 BASIC17.2■□□□□ 0.34
NDUFA11Q86Y39 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NDUFA11Q86Y39 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NDUFA11Q86Y39 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NDUFA11Q86Y39 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NDUFA11Q86Y39 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
NDUFA11Q86Y39 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NDUFA11Q86Y39 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NDUFA11Q86Y39 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
NDUFA11Q86Y39 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC17.19■□□□□ 0.34
NDUFA11Q86Y39 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NDUFA11Q86Y39 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
NDUFA11Q86Y39 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NDUFA11Q86Y39 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NDUFA11Q86Y39 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC17.19■□□□□ 0.34
NDUFA11Q86Y39 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC17.19■□□□□ 0.34
NDUFA11Q86Y39 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NDUFA11Q86Y39 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC17.19■□□□□ 0.34
NDUFA11Q86Y39 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC17.19■□□□□ 0.34
NDUFA11Q86Y39 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NDUFA11Q86Y39 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NDUFA11Q86Y39 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 280 ms