Protein–RNA interactions for Protein: Q7RTT4

SSX8, Protein SSX8, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX8Q7RTT4 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SSX8Q7RTT4 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.27■□□□□ 0.68
SSX8Q7RTT4 RARRES2P6-201ENST00000567333 442 ntBASIC19.27■□□□□ 0.68
SSX8Q7RTT4 MIR5787-201ENST00000611784 55 ntBASIC19.27■□□□□ 0.68
SSX8Q7RTT4 AC004812.2-201ENST00000611079 2094 ntBASIC19.27■□□□□ 0.68
SSX8Q7RTT4 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SSX8Q7RTT4 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.27■□□□□ 0.67
SSX8Q7RTT4 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
SSX8Q7RTT4 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SSX8Q7RTT4 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
SSX8Q7RTT4 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SSX8Q7RTT4 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC19.26■□□□□ 0.67
SSX8Q7RTT4 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
SSX8Q7RTT4 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SSX8Q7RTT4 AC087239.1-201ENST00000622671 572 ntBASIC19.26■□□□□ 0.67
SSX8Q7RTT4 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SSX8Q7RTT4 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SSX8Q7RTT4 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
SSX8Q7RTT4 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SSX8Q7RTT4 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SSX8Q7RTT4 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
SSX8Q7RTT4 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC19.25■□□□□ 0.67
SSX8Q7RTT4 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SSX8Q7RTT4 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SSX8Q7RTT4 MIR572-201ENST00000384983 95 ntBASIC19.25■□□□□ 0.67
SSX8Q7RTT4 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.25■□□□□ 0.67
SSX8Q7RTT4 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.25■□□□□ 0.67
SSX8Q7RTT4 AL354811.1-201ENST00000610286 706 ntBASIC19.25■□□□□ 0.67
SSX8Q7RTT4 MIR6821-201ENST00000617625 74 ntBASIC19.25■□□□□ 0.67
SSX8Q7RTT4 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.25■□□□□ 0.67
SSX8Q7RTT4 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SSX8Q7RTT4 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.24■□□□□ 0.67
SSX8Q7RTT4 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
SSX8Q7RTT4 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.24■□□□□ 0.67
SSX8Q7RTT4 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SSX8Q7RTT4 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SSX8Q7RTT4 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SSX8Q7RTT4 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
SSX8Q7RTT4 AC097381.1-201ENST00000429019 1296 ntBASIC19.24■□□□□ 0.67
SSX8Q7RTT4 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.24■□□□□ 0.67
SSX8Q7RTT4 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SSX8Q7RTT4 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
SSX8Q7RTT4 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SSX8Q7RTT4 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.24■□□□□ 0.67
SSX8Q7RTT4 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SSX8Q7RTT4 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SSX8Q7RTT4 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SSX8Q7RTT4 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.24■□□□□ 0.67
SSX8Q7RTT4 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
SSX8Q7RTT4 TSPY26P-201ENST00000476365 1326 ntBASIC19.24■□□□□ 0.67
SSX8Q7RTT4 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SSX8Q7RTT4 AC079630.1-202ENST00000618127 1840 ntBASIC19.23■□□□□ 0.67
SSX8Q7RTT4 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.23■□□□□ 0.67
SSX8Q7RTT4 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SSX8Q7RTT4 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.23■□□□□ 0.67
SSX8Q7RTT4 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.23■□□□□ 0.67
SSX8Q7RTT4 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SSX8Q7RTT4 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.23■□□□□ 0.67
SSX8Q7RTT4 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.22■□□□□ 0.67
SSX8Q7RTT4 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SSX8Q7RTT4 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
SSX8Q7RTT4 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SSX8Q7RTT4 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.22■□□□□ 0.67
SSX8Q7RTT4 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SSX8Q7RTT4 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.22■□□□□ 0.67
SSX8Q7RTT4 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SSX8Q7RTT4 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.22■□□□□ 0.67
SSX8Q7RTT4 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.22■□□□□ 0.67
SSX8Q7RTT4 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.22■□□□□ 0.67
SSX8Q7RTT4 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.22■□□□□ 0.67
SSX8Q7RTT4 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SSX8Q7RTT4 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.22■□□□□ 0.67
SSX8Q7RTT4 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SSX8Q7RTT4 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.21■□□□□ 0.67
SSX8Q7RTT4 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SSX8Q7RTT4 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SSX8Q7RTT4 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SSX8Q7RTT4 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SSX8Q7RTT4 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SSX8Q7RTT4 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.21■□□□□ 0.67
SSX8Q7RTT4 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.21■□□□□ 0.67
SSX8Q7RTT4 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SSX8Q7RTT4 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SSX8Q7RTT4 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SSX8Q7RTT4 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
SSX8Q7RTT4 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SSX8Q7RTT4 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SSX8Q7RTT4 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SSX8Q7RTT4 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SSX8Q7RTT4 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
SSX8Q7RTT4 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SSX8Q7RTT4 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.2■□□□□ 0.66
SSX8Q7RTT4 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
SSX8Q7RTT4 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.2■□□□□ 0.66
SSX8Q7RTT4 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.2■□□□□ 0.66
SSX8Q7RTT4 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SSX8Q7RTT4 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.2■□□□□ 0.66
SSX8Q7RTT4 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SSX8Q7RTT4 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.19■□□□□ 0.66
SSX8Q7RTT4 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms