Protein–RNA interactions for Protein: Q70CQ4

USP31, Ubiquitin carboxyl-terminal hydrolase 31, humanhuman

Predictions only

Length 1,352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP31Q70CQ4 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
USP31Q70CQ4 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
USP31Q70CQ4 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC30.22■■■□□ 2.43
USP31Q70CQ4 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC30.22■■■□□ 2.43
USP31Q70CQ4 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC30.22■■■□□ 2.43
USP31Q70CQ4 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
USP31Q70CQ4 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
USP31Q70CQ4 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
USP31Q70CQ4 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC30.21■■■□□ 2.43
USP31Q70CQ4 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC30.21■■■□□ 2.43
USP31Q70CQ4 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC30.21■■■□□ 2.43
USP31Q70CQ4 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
USP31Q70CQ4 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
USP31Q70CQ4 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
USP31Q70CQ4 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC30.2■■■□□ 2.43
USP31Q70CQ4 AC090192.1-201ENST00000517740 490 ntBASIC30.2■■■□□ 2.43
USP31Q70CQ4 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
USP31Q70CQ4 KRT18P14-201ENST00000534205 1250 ntBASIC30.2■■■□□ 2.43
USP31Q70CQ4 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC30.2■■■□□ 2.43
USP31Q70CQ4 AL137784.2-201ENST00000607332 1000 ntBASIC30.2■■■□□ 2.43
USP31Q70CQ4 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC30.2■■■□□ 2.43
USP31Q70CQ4 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
USP31Q70CQ4 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC30.2■■■□□ 2.42
USP31Q70CQ4 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC30.19■■■□□ 2.42
USP31Q70CQ4 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC30.19■■■□□ 2.42
USP31Q70CQ4 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
USP31Q70CQ4 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC30.19■■■□□ 2.42
USP31Q70CQ4 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC30.19■■■□□ 2.42
USP31Q70CQ4 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
USP31Q70CQ4 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC30.19■■■□□ 2.42
USP31Q70CQ4 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
USP31Q70CQ4 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC30.19■■■□□ 2.42
USP31Q70CQ4 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
USP31Q70CQ4 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
USP31Q70CQ4 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
USP31Q70CQ4 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC30.18■■■□□ 2.42
USP31Q70CQ4 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC30.18■■■□□ 2.42
USP31Q70CQ4 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC30.18■■■□□ 2.42
USP31Q70CQ4 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC30.18■■■□□ 2.42
USP31Q70CQ4 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
USP31Q70CQ4 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
USP31Q70CQ4 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
USP31Q70CQ4 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
USP31Q70CQ4 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
USP31Q70CQ4 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
USP31Q70CQ4 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC30.17■■■□□ 2.42
USP31Q70CQ4 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC30.17■■■□□ 2.42
USP31Q70CQ4 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC30.16■■■□□ 2.42
USP31Q70CQ4 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
USP31Q70CQ4 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC30.16■■■□□ 2.42
USP31Q70CQ4 LINC02228-203ENST00000641970 1355 ntBASIC30.16■■■□□ 2.42
USP31Q70CQ4 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
USP31Q70CQ4 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
USP31Q70CQ4 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC30.16■■■□□ 2.42
USP31Q70CQ4 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
USP31Q70CQ4 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC30.16■■■□□ 2.42
USP31Q70CQ4 LINC00543-201ENST00000567234 1845 ntBASIC30.16■■■□□ 2.42
USP31Q70CQ4 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
USP31Q70CQ4 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC30.15■■■□□ 2.42
USP31Q70CQ4 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC30.15■■■□□ 2.42
USP31Q70CQ4 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
USP31Q70CQ4 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC30.15■■■□□ 2.42
USP31Q70CQ4 MPST-204ENST00000404393 1329 ntTSL 5 BASIC30.15■■■□□ 2.42
USP31Q70CQ4 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC30.14■■■□□ 2.42
USP31Q70CQ4 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
USP31Q70CQ4 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
USP31Q70CQ4 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC30.14■■■□□ 2.42
USP31Q70CQ4 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC30.14■■■□□ 2.42
USP31Q70CQ4 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC30.14■■■□□ 2.42
USP31Q70CQ4 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.41
USP31Q70CQ4 ME3-201ENST00000323418 1068 ntTSL 5 BASIC30.14■■■□□ 2.41
USP31Q70CQ4 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC30.14■■■□□ 2.41
USP31Q70CQ4 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC30.14■■■□□ 2.41
USP31Q70CQ4 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC30.14■■■□□ 2.41
USP31Q70CQ4 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC30.14■■■□□ 2.41
USP31Q70CQ4 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC30.14■■■□□ 2.41
USP31Q70CQ4 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC30.14■■■□□ 2.41
USP31Q70CQ4 SHD-204ENST00000599689 1729 ntTSL 5 BASIC30.14■■■□□ 2.41
USP31Q70CQ4 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
USP31Q70CQ4 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC30.13■■■□□ 2.41
USP31Q70CQ4 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC30.13■■■□□ 2.41
USP31Q70CQ4 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC30.13■■■□□ 2.41
USP31Q70CQ4 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
USP31Q70CQ4 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
USP31Q70CQ4 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
USP31Q70CQ4 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
USP31Q70CQ4 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
USP31Q70CQ4 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC30.12■■■□□ 2.41
USP31Q70CQ4 NT5C3AP1-201ENST00000394500 1012 ntBASIC30.12■■■□□ 2.41
USP31Q70CQ4 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC30.12■■■□□ 2.41
USP31Q70CQ4 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
USP31Q70CQ4 KRT18P61-201ENST00000585825 1298 ntBASIC30.12■■■□□ 2.41
USP31Q70CQ4 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC30.12■■■□□ 2.41
USP31Q70CQ4 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
USP31Q70CQ4 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
USP31Q70CQ4 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC30.11■■■□□ 2.41
USP31Q70CQ4 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
USP31Q70CQ4 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
USP31Q70CQ4 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC30.11■■■□□ 2.41
USP31Q70CQ4 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC30.11■■■□□ 2.41
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms