Protein–RNA interactions for Protein: Q6W349

LINC00575, Putative uncharacterized protein encoded by LINC00575, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00575Q6W349 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
LINC00575Q6W349 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LINC00575Q6W349 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LINC00575Q6W349 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LINC00575Q6W349 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC14.08□□□□□ -0.16
LINC00575Q6W349 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LINC00575Q6W349 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LINC00575Q6W349 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
LINC00575Q6W349 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
LINC00575Q6W349 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LINC00575Q6W349 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
LINC00575Q6W349 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LINC00575Q6W349 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
LINC00575Q6W349 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC14.07□□□□□ -0.16
LINC00575Q6W349 ALDH1A3-203ENST00000557963 1670 ntBASIC14.07□□□□□ -0.16
LINC00575Q6W349 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LINC00575Q6W349 AC080038.3-201ENST00000623346 1952 ntBASIC14.07□□□□□ -0.16
LINC00575Q6W349 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LINC00575Q6W349 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
LINC00575Q6W349 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
LINC00575Q6W349 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
LINC00575Q6W349 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LINC00575Q6W349 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
LINC00575Q6W349 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LINC00575Q6W349 AC093536.1-201ENST00000569153 554 ntBASIC14.07□□□□□ -0.16
LINC00575Q6W349 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LINC00575Q6W349 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC14.07□□□□□ -0.16
LINC00575Q6W349 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LINC00575Q6W349 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LINC00575Q6W349 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LINC00575Q6W349 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
LINC00575Q6W349 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00575Q6W349 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00575Q6W349 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00575Q6W349 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00575Q6W349 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00575Q6W349 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00575Q6W349 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC14.06□□□□□ -0.16
LINC00575Q6W349 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
LINC00575Q6W349 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC14.06□□□□□ -0.16
LINC00575Q6W349 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC14.06□□□□□ -0.16
LINC00575Q6W349 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
LINC00575Q6W349 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
LINC00575Q6W349 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00575Q6W349 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00575Q6W349 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
LINC00575Q6W349 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC14.06□□□□□ -0.16
LINC00575Q6W349 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00575Q6W349 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00575Q6W349 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00575Q6W349 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00575Q6W349 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00575Q6W349 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00575Q6W349 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC14.05□□□□□ -0.16
LINC00575Q6W349 AL121603.2-201ENST00000557373 2117 ntBASIC14.05□□□□□ -0.16
LINC00575Q6W349 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
LINC00575Q6W349 AC073130.3-201ENST00000624389 2278 ntBASIC14.05□□□□□ -0.16
LINC00575Q6W349 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
LINC00575Q6W349 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
LINC00575Q6W349 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
LINC00575Q6W349 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
LINC00575Q6W349 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC14.05□□□□□ -0.16
LINC00575Q6W349 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00575Q6W349 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00575Q6W349 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00575Q6W349 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00575Q6W349 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00575Q6W349 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00575Q6W349 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00575Q6W349 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
LINC00575Q6W349 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
LINC00575Q6W349 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
LINC00575Q6W349 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00575Q6W349 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
LINC00575Q6W349 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC14.04□□□□□ -0.16
LINC00575Q6W349 AC060814.1-201ENST00000554326 538 ntBASIC14.04□□□□□ -0.16
LINC00575Q6W349 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00575Q6W349 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC14.04□□□□□ -0.16
LINC00575Q6W349 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC14.04□□□□□ -0.16
LINC00575Q6W349 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00575Q6W349 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC14.04□□□□□ -0.16
LINC00575Q6W349 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC14.04□□□□□ -0.16
LINC00575Q6W349 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
LINC00575Q6W349 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00575Q6W349 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00575Q6W349 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC14.03□□□□□ -0.16
LINC00575Q6W349 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
LINC00575Q6W349 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00575Q6W349 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00575Q6W349 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00575Q6W349 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00575Q6W349 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00575Q6W349 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00575Q6W349 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00575Q6W349 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00575Q6W349 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC14.03□□□□□ -0.16
LINC00575Q6W349 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00575Q6W349 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
LINC00575Q6W349 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
LINC00575Q6W349 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms