Protein–RNA interactions for Protein: Q63829

Commd3, COMM domain-containing protein 3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Commd3Q63829 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Commd3Q63829 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC16.5■□□□□ 0.23
Commd3Q63829 AC151971.4-201ENSMUST00000214717 704 ntBASIC16.5■□□□□ 0.23
Commd3Q63829 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Commd3Q63829 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Commd3Q63829 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC16.5■□□□□ 0.23
Commd3Q63829 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC16.49■□□□□ 0.23
Commd3Q63829 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Commd3Q63829 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Commd3Q63829 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Commd3Q63829 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC16.49■□□□□ 0.23
Commd3Q63829 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Commd3Q63829 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Commd3Q63829 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC16.49■□□□□ 0.23
Commd3Q63829 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Commd3Q63829 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Commd3Q63829 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Commd3Q63829 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Commd3Q63829 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Commd3Q63829 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Commd3Q63829 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Commd3Q63829 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Commd3Q63829 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Commd3Q63829 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Commd3Q63829 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Commd3Q63829 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Commd3Q63829 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Commd3Q63829 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Commd3Q63829 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Commd3Q63829 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Commd3Q63829 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Commd3Q63829 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Commd3Q63829 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Commd3Q63829 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Commd3Q63829 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Commd3Q63829 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Commd3Q63829 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Commd3Q63829 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Commd3Q63829 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Commd3Q63829 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Commd3Q63829 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Commd3Q63829 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Commd3Q63829 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Commd3Q63829 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Commd3Q63829 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Commd3Q63829 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Commd3Q63829 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Commd3Q63829 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Commd3Q63829 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC16.46■□□□□ 0.23
Commd3Q63829 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Commd3Q63829 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
Commd3Q63829 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Commd3Q63829 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Commd3Q63829 Golph3-205ENSMUST00000228671 2842 ntBASIC16.46■□□□□ 0.23
Commd3Q63829 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Commd3Q63829 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Commd3Q63829 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Commd3Q63829 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Commd3Q63829 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Commd3Q63829 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Commd3Q63829 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Commd3Q63829 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Commd3Q63829 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC16.45■□□□□ 0.22
Commd3Q63829 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Commd3Q63829 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC16.45■□□□□ 0.22
Commd3Q63829 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Commd3Q63829 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Commd3Q63829 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Commd3Q63829 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Commd3Q63829 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Commd3Q63829 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Commd3Q63829 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Commd3Q63829 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Commd3Q63829 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Commd3Q63829 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Commd3Q63829 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Commd3Q63829 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Commd3Q63829 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Commd3Q63829 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC16.44■□□□□ 0.22
Commd3Q63829 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC16.44■□□□□ 0.22
Commd3Q63829 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Commd3Q63829 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Commd3Q63829 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Commd3Q63829 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Commd3Q63829 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Commd3Q63829 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Commd3Q63829 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Commd3Q63829 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Commd3Q63829 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Commd3Q63829 Gm11687-201ENSMUST00000118911 886 ntBASIC16.43■□□□□ 0.22
Commd3Q63829 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Commd3Q63829 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Commd3Q63829 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Commd3Q63829 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Commd3Q63829 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Commd3Q63829 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Commd3Q63829 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Commd3Q63829 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Commd3Q63829 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Commd3Q63829 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC16.42■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 124.2 ms