Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.66■□□□□ 0.9
RPS3AP61247 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RPS3AP61247 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
RPS3AP61247 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RPS3AP61247 RNF165-205ENST00000588679 2904 ntBASIC20.66■□□□□ 0.9
RPS3AP61247 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.66■□□□□ 0.9
RPS3AP61247 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
RPS3AP61247 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RPS3AP61247 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RPS3AP61247 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
RPS3AP61247 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RPS3AP61247 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RPS3AP61247 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
RPS3AP61247 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
RPS3AP61247 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPS3AP61247 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
RPS3AP61247 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.65■□□□□ 0.9
RPS3AP61247 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RPS3AP61247 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.65■□□□□ 0.9
RPS3AP61247 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.65■□□□□ 0.9
RPS3AP61247 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPS3AP61247 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPS3AP61247 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.64■□□□□ 0.9
RPS3AP61247 AC131274.2-201ENST00000580697 1507 ntBASIC20.64■□□□□ 0.9
RPS3AP61247 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
RPS3AP61247 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
RPS3AP61247 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
RPS3AP61247 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RPS3AP61247 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RPS3AP61247 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.64■□□□□ 0.89
RPS3AP61247 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.64■□□□□ 0.89
RPS3AP61247 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.64■□□□□ 0.89
RPS3AP61247 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.64■□□□□ 0.89
RPS3AP61247 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RPS3AP61247 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RPS3AP61247 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RPS3AP61247 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
RPS3AP61247 DUSP8P3-201ENST00000399571 1760 ntBASIC20.64■□□□□ 0.89
RPS3AP61247 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RPS3AP61247 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RPS3AP61247 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.63■□□□□ 0.89
RPS3AP61247 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RPS3AP61247 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.63■□□□□ 0.89
RPS3AP61247 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RPS3AP61247 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RPS3AP61247 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RPS3AP61247 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
RPS3AP61247 AC127496.7-201ENST00000625110 1798 ntBASIC20.62■□□□□ 0.89
RPS3AP61247 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
RPS3AP61247 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.62■□□□□ 0.89
RPS3AP61247 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
RPS3AP61247 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.62■□□□□ 0.89
RPS3AP61247 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RPS3AP61247 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.62■□□□□ 0.89
RPS3AP61247 AL356740.2-201ENST00000601559 647 ntBASIC20.62■□□□□ 0.89
RPS3AP61247 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RPS3AP61247 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RPS3AP61247 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RPS3AP61247 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RPS3AP61247 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.61■□□□□ 0.89
RPS3AP61247 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RPS3AP61247 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.61■□□□□ 0.89
RPS3AP61247 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RPS3AP61247 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RPS3AP61247 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.61■□□□□ 0.89
RPS3AP61247 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.61■□□□□ 0.89
RPS3AP61247 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RPS3AP61247 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
RPS3AP61247 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
RPS3AP61247 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.6■□□□□ 0.89
RPS3AP61247 LINC00526-201ENST00000581067 1875 ntBASIC20.6■□□□□ 0.89
RPS3AP61247 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.6■□□□□ 0.89
RPS3AP61247 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RPS3AP61247 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RPS3AP61247 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
RPS3AP61247 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
RPS3AP61247 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
RPS3AP61247 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RPS3AP61247 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.6■□□□□ 0.89
RPS3AP61247 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.6■□□□□ 0.89
RPS3AP61247 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RPS3AP61247 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RPS3AP61247 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
RPS3AP61247 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
RPS3AP61247 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RPS3AP61247 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RPS3AP61247 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RPS3AP61247 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RPS3AP61247 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RPS3AP61247 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RPS3AP61247 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.59■□□□□ 0.89
RPS3AP61247 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RPS3AP61247 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RPS3AP61247 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
RPS3AP61247 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RPS3AP61247 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.58■□□□□ 0.89
RPS3AP61247 AC005703.6-201ENST00000623265 1329 ntBASIC20.58■□□□□ 0.89
RPS3AP61247 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
RPS3AP61247 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RPS3AP61247 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms