Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.27■□□□□ 0.84
CXCR4P61073 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CXCR4P61073 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
CXCR4P61073 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CXCR4P61073 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.27■□□□□ 0.83
CXCR4P61073 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
CXCR4P61073 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CXCR4P61073 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CXCR4P61073 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CXCR4P61073 IDNK-203ENST00000405990 629 ntTSL 2 BASIC20.26■□□□□ 0.83
CXCR4P61073 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.26■□□□□ 0.83
CXCR4P61073 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.26■□□□□ 0.83
CXCR4P61073 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CXCR4P61073 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
CXCR4P61073 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CXCR4P61073 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CXCR4P61073 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.25■□□□□ 0.83
CXCR4P61073 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.25■□□□□ 0.83
CXCR4P61073 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CXCR4P61073 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CXCR4P61073 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CXCR4P61073 MIR6765-201ENST00000614092 87 ntBASIC20.25■□□□□ 0.83
CXCR4P61073 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.25■□□□□ 0.83
CXCR4P61073 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
CXCR4P61073 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CXCR4P61073 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CXCR4P61073 HYI-213ENST00000583037 1322 ntTSL 5 BASIC20.25■□□□□ 0.83
CXCR4P61073 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
CXCR4P61073 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CXCR4P61073 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CXCR4P61073 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CXCR4P61073 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CXCR4P61073 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CXCR4P61073 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CXCR4P61073 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CXCR4P61073 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.24■□□□□ 0.83
CXCR4P61073 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CXCR4P61073 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
CXCR4P61073 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CXCR4P61073 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CXCR4P61073 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
CXCR4P61073 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.23■□□□□ 0.83
CXCR4P61073 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.23■□□□□ 0.83
CXCR4P61073 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
CXCR4P61073 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CXCR4P61073 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CXCR4P61073 DUX4L9-201ENST00000449051 1259 ntBASIC20.23■□□□□ 0.83
CXCR4P61073 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CXCR4P61073 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.23■□□□□ 0.83
CXCR4P61073 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.23■□□□□ 0.83
CXCR4P61073 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CXCR4P61073 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CXCR4P61073 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CXCR4P61073 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CXCR4P61073 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.22■□□□□ 0.83
CXCR4P61073 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CXCR4P61073 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.22■□□□□ 0.83
CXCR4P61073 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.22■□□□□ 0.83
CXCR4P61073 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CXCR4P61073 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CXCR4P61073 PKD1P6-201ENST00000343738 4769 ntBASIC20.22■□□□□ 0.83
CXCR4P61073 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.22■□□□□ 0.83
CXCR4P61073 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.22■□□□□ 0.83
CXCR4P61073 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC20.21■□□□□ 0.83
CXCR4P61073 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC20.21■□□□□ 0.83
CXCR4P61073 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CXCR4P61073 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CXCR4P61073 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CXCR4P61073 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CXCR4P61073 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CXCR4P61073 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.21■□□□□ 0.83
CXCR4P61073 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.21■□□□□ 0.83
CXCR4P61073 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CXCR4P61073 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CXCR4P61073 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CXCR4P61073 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
CXCR4P61073 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CXCR4P61073 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CXCR4P61073 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.2■□□□□ 0.82
CXCR4P61073 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CXCR4P61073 AC087742.1-201ENST00000575880 1738 ntBASIC20.2■□□□□ 0.82
CXCR4P61073 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
CXCR4P61073 AC131274.2-201ENST00000580697 1507 ntBASIC20.2■□□□□ 0.82
CXCR4P61073 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CXCR4P61073 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CXCR4P61073 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CXCR4P61073 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CXCR4P61073 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CXCR4P61073 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CXCR4P61073 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CXCR4P61073 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CXCR4P61073 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CXCR4P61073 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CXCR4P61073 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.18■□□□□ 0.82
CXCR4P61073 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CXCR4P61073 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CXCR4P61073 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CXCR4P61073 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CXCR4P61073 FAM99A-202ENST00000538190 1989 ntBASIC20.18■□□□□ 0.82
CXCR4P61073 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms