Protein–RNA interactions for Protein: P53960

YNL040W, Putative alanyl-tRNA editing protein alaX, yeastyeast

Predicted RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YNL040WP53960 MAD3YJL013C 1548 nt4.16□□□□□ -1.74
YNL040WP53960 PRP9YDL030W 1593 nt4.16□□□□□ -1.74
YNL040WP53960 DPB4YDR121W 591 nt4.16□□□□□ -1.74
YNL040WP53960 YGL199CYGL199C 471 nt4.16□□□□□ -1.74
YNL040WP53960 MRPL25YGR076C 474 nt4.16□□□□□ -1.74
YNL040WP53960 YHR112CYHR112C 1137 nt4.16□□□□□ -1.74
YNL040WP53960 OCA1YNL099C 717 nt4.16□□□□□ -1.74
YNL040WP53960 SLX1YBR228W 915 nt4.16□□□□□ -1.74
YNL040WP53960 LDB17YDL146W 1476 nt4.16□□□□□ -1.74
YNL040WP53960 YDR132CYDR132C 1488 nt4.16□□□□□ -1.74
YNL040WP53960 DXO1YDR370C 1329 nt4.16□□□□□ -1.74
YNL040WP53960 YNR065CYNR065C 3351 nt4.16□□□□□ -1.74
YNL040WP53960 HUL4YJR036C 2679 nt4.15□□□□□ -1.74
YNL040WP53960 YER134CYER134C 537 nt4.15□□□□□ -1.75
YNL040WP53960 RPL8AYHL033C 771 nt4.15□□□□□ -1.75
YNL040WP53960 MAD2YJL030W 591 nt4.15□□□□□ -1.75
YNL040WP53960 UIP3YAR027W 708 nt4.15□□□□□ -1.75
YNL040WP53960 SHE1YBL031W 1017 nt4.15□□□□□ -1.75
YNL040WP53960 RPL18BYNL301C 561 nt4.15□□□□□ -1.75
YNL040WP53960 YPL014WYPL014W 1146 nt4.15□□□□□ -1.75
YNL040WP53960 ALG5YPL227C 1005 nt4.15□□□□□ -1.75
YNL040WP53960 RPB2YOR151C 3675 nt4.15□□□□□ -1.75
YNL040WP53960 PRM7YDL039C 2097 nt4.15□□□□□ -1.75
YNL040WP53960 KRE29YER038C 1395 nt4.14□□□□□ -1.75
YNL040WP53960 SEO1YAL067C 1782 nt4.14□□□□□ -1.75
YNL040WP53960 WHI4YDL224C 1950 nt4.14□□□□□ -1.75
YNL040WP53960 DIP2YLR129W 2832 nt4.14□□□□□ -1.75
YNL040WP53960 MRPL20YKR085C 588 nt4.14□□□□□ -1.75
YNL040WP53960 EOS1YNL080C 1101 nt4.14□□□□□ -1.75
YNL040WP53960 MCM2YBL023C 2607 nt4.13□□□□□ -1.75
YNL040WP53960 ALG9YNL219C 1668 nt4.13□□□□□ -1.75
YNL040WP53960 MNN1YER001W 2289 nt4.13□□□□□ -1.75
YNL040WP53960 CNL1YDR357C 369 nt4.13□□□□□ -1.75
YNL040WP53960 YDR445CYDR445C 408 nt4.13□□□□□ -1.75
YNL040WP53960 CHL1YPL008W 2586 nt4.13□□□□□ -1.75
YNL040WP53960 MTC4YBR255W 2085 nt4.13□□□□□ -1.75
YNL040WP53960 NUG1YER006W 1563 nt4.13□□□□□ -1.75
YNL040WP53960 IZH3YLR023C 1632 nt4.13□□□□□ -1.75
YNL040WP53960 MEF2YJL102W 2460 nt4.12□□□□□ -1.75
YNL040WP53960 YGL088WYGL088W 366 nt4.12□□□□□ -1.75
YNL040WP53960 CUZ1YNL155W 825 nt4.12□□□□□ -1.75
YNL040WP53960 YBR056W-AYBR056W-A 201 nt4.12□□□□□ -1.75
YNL040WP53960 YPR059CYPR059C 387 nt4.12□□□□□ -1.75
YNL040WP53960 YIL092WYIL092W 1902 nt4.12□□□□□ -1.75
YNL040WP53960 YOL075CYOL075C 3885 nt4.12□□□□□ -1.75
YNL040WP53960 ACE2YLR131C 2313 nt4.11□□□□□ -1.75
YNL040WP53960 TRM8YDL201W 861 nt4.11□□□□□ -1.75
YNL040WP53960 IRC22YEL001C 678 nt4.11□□□□□ -1.75
YNL040WP53960 PCL6YER059W 1263 nt4.11□□□□□ -1.75
YNL040WP53960 YML119WYML119W 1074 nt4.11□□□□□ -1.75
YNL040WP53960 YNR061CYNR061C 660 nt4.11□□□□□ -1.75
YNL040WP53960 AVT1YJR001W 1809 nt4.11□□□□□ -1.75
YNL040WP53960 ALG2YGL065C 1512 nt4.11□□□□□ -1.75
YNL040WP53960 MLH2YLR035C 2088 nt4.1□□□□□ -1.75
YNL040WP53960 MNL1YHR204W 2391 nt4.1□□□□□ -1.75
YNL040WP53960 BUD16YEL029C 939 nt4.1□□□□□ -1.75
YNL040WP53960 YER133W-AYER133W-A 342 nt4.1□□□□□ -1.75
YNL040WP53960 PPZ1YML016C 2079 nt4.1□□□□□ -1.75
YNL040WP53960 DBP3YGL078C 1572 nt4.1□□□□□ -1.75
YNL040WP53960 YBR138CYBR138C 1575 nt4.1□□□□□ -1.75
YNL040WP53960 YHR032C-AYHR032C-A 120 nt4.09□□□□□ -1.75
YNL040WP53960 YMR114CYMR114C 1107 nt4.09□□□□□ -1.75
YNL040WP53960 CWC25YNL245C 540 nt4.09□□□□□ -1.75
YNL040WP53960 GCV1YDR019C 1203 nt4.08□□□□□ -1.76
YNL040WP53960 TMN2YDR107C 2019 nt4.08□□□□□ -1.76
YNL040WP53960 AHA1YDR214W 1053 nt4.08□□□□□ -1.76
YNL040WP53960 YLR152CYLR152C 1731 nt4.08□□□□□ -1.76
YNL040WP53960 UTP23YOR004W 765 nt4.08□□□□□ -1.76
YNL040WP53960 TRE1YPL176C 2352 nt4.08□□□□□ -1.76
YNL040WP53960 SAS10YDL153C 1833 nt4.07□□□□□ -1.76
YNL040WP53960 FAR8YMR029C 1572 nt4.07□□□□□ -1.76
YNL040WP53960 IRC9YJL142C 393 nt4.07□□□□□ -1.76
YNL040WP53960 MHO1YJR008W 1017 nt4.07□□□□□ -1.76
YNL040WP53960 KTR7YIL085C 1554 nt4.06□□□□□ -1.76
YNL040WP53960 RKM2YDR198C 1440 nt4.06□□□□□ -1.76
YNL040WP53960 BBC1YJL020C 3474 nt4.06□□□□□ -1.76
YNL040WP53960 YDR230WYDR230W 348 nt4.06□□□□□ -1.76
YNL040WP53960 ACT1YFL039C 1128 nt4.06□□□□□ -1.76
YNL040WP53960 SKI8YGL213C 1194 nt4.06□□□□□ -1.76
YNL040WP53960 GRE3YHR104W 984 nt4.06□□□□□ -1.76
YNL040WP53960 HIS5YIL116W 1158 nt4.06□□□□□ -1.76
YNL040WP53960 RPS0BYLR048W 759 nt4.06□□□□□ -1.76
YNL040WP53960 OPY2YPR075C 1083 nt4.06□□□□□ -1.76
YNL040WP53960 PRE2YPR103W 864 nt4.06□□□□□ -1.76
YNL040WP53960 KIN4YOR233W 2403 nt4.06□□□□□ -1.76
YNL040WP53960 CWH43YCR017C 2862 nt4.06□□□□□ -1.76
YNL040WP53960 SMF1YOL122C 1728 nt4.06□□□□□ -1.76
YNL040WP53960 STB2YMR053C 2553 nt4.06□□□□□ -1.76
YNL040WP53960 ECM16YMR128W 3804 nt4.05□□□□□ -1.76
YNL040WP53960 IDS2YJL146W 1410 nt4.05□□□□□ -1.76
YNL040WP53960 NNK1YKL171W 2787 nt4.05□□□□□ -1.76
YNL040WP53960 SNF2YOR290C 5112 nt4.05□□□□□ -1.76
YNL040WP53960 NOP13YNL175C 1212 nt4.05□□□□□ -1.76
YNL040WP53960 YBR225WYBR225W 2703 nt4.04□□□□□ -1.76
YNL040WP53960 GAC1YOR178C 2382 nt4.04□□□□□ -1.76
YNL040WP53960 MAG1YER142C 891 nt4.04□□□□□ -1.76
YNL040WP53960 FUR1YHR128W 651 nt4.04□□□□□ -1.76
YNL040WP53960 HIS6YIL020C 786 nt4.04□□□□□ -1.76
YNL040WP53960 UTP11YKL099C 753 nt4.04□□□□□ -1.76
YNL040WP53960 ADD66YKL206C 804 nt4.04□□□□□ -1.76
Retrieved 100 of 7,029 protein–RNA pairs in 30.2 ms