Protein–RNA interactions for Protein: P43569

CAF16, CCR4-associated factor 16, yeast

Predictions only

Length 289 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
CAF16	P43569	UTR4	YEL038W	684 nt		5.01	□□□□□ -1.61
CAF16	P43569	RPS2	YGL123W	765 nt		5.01	□□□□□ -1.61
CAF16	P43569	SPO7	YAL009W	780 nt		5.01	□□□□□ -1.61
CAF16	P43569	RCN1	YKL159C	636 nt		5.01	□□□□□ -1.61
CAF16	P43569	YLR346C	YLR346C	306 nt		5.01	□□□□□ -1.61
CAF16	P43569	SRT1	YMR101C	1032 nt		5.01	□□□□□ -1.61
CAF16	P43569	TRI1	YMR233W	681 nt		5.01	□□□□□ -1.61
CAF16	P43569	ATG8	YBL078C	354 nt		5.01	□□□□□ -1.61
CAF16	P43569	YPR153W	YPR153W	423 nt		5.01	□□□□□ -1.61
CAF16	P43569	POP4	YBR257W	840 nt		5.01	□□□□□ -1.61
CAF16	P43569	SAG1	YJR004C	1953 nt		5.01	□□□□□ -1.61
CAF16	P43569	RAT1	YOR048C	3021 nt		5.01	□□□□□ -1.61
CAF16	P43569	PMT4	YJR143C	2289 nt		5	□□□□□ -1.61
CAF16	P43569	SNF3	YDL194W	2655 nt		5	□□□□□ -1.61
CAF16	P43569	MCX1	YBR227C	1563 nt		5	□□□□□ -1.61
CAF16	P43569	AFT1	YGL071W	2073 nt		5	□□□□□ -1.61
CAF16	P43569	TYW1	YPL207W	2433 nt		5	□□□□□ -1.61
CAF16	P43569	SNU23	YDL098C	585 nt		5	□□□□□ -1.61
CAF16	P43569	KRE28	YDR532C	1158 nt		5	□□□□□ -1.61
CAF16	P43569	LST7	YGR057C	729 nt		5	□□□□□ -1.61
CAF16	P43569	COX6	YHR051W	447 nt		5	□□□□□ -1.61
CAF16	P43569	YIL029W-A	YIL029W-A	372 nt		5	□□□□□ -1.61
CAF16	P43569	GVP36	YIL041W	981 nt		5	□□□□□ -1.61
CAF16	P43569	POR2	YIL114C	846 nt		5	□□□□□ -1.61
CAF16	P43569	DCS1	YLR270W	1053 nt		5	□□□□□ -1.61
CAF16	P43569	IMP2	YMR035W	534 nt		5	□□□□□ -1.61
CAF16	P43569	SUB1	YMR039C	879 nt		5	□□□□□ -1.61
CAF16	P43569	YNL320W	YNL320W	855 nt		5	□□□□□ -1.61
CAF16	P43569	UIP4	YPL186C	915 nt		5	□□□□□ -1.61
CAF16	P43569	SPT14	YPL175W	1359 nt		5	□□□□□ -1.61
CAF16	P43569	YIG1	YPL201C	1386 nt		5	□□□□□ -1.61
CAF16	P43569	MCM3	YEL032W	2916 nt		5	□□□□□ -1.61
CAF16	P43569	HIS4	YCL030C	2400 nt		4.99	□□□□□ -1.61
CAF16	P43569	PDH1	YPR002W	1551 nt		4.99	□□□□□ -1.61
CAF16	P43569	snR83	snR83	306 nt		4.99	□□□□□ -1.61
CAF16	P43569	YEL010W	YEL010W	351 nt		4.99	□□□□□ -1.61
CAF16	P43569	YGL185C	YGL185C	1140 nt		4.99	□□□□□ -1.61
CAF16	P43569	YGL204C	YGL204C	306 nt		4.99	□□□□□ -1.61
CAF16	P43569	CBP4	YGR174C	513 nt		4.99	□□□□□ -1.61
CAF16	P43569	MIC26	YGR235C	702 nt		4.99	□□□□□ -1.61
CAF16	P43569	YKR045C	YKR045C	552 nt		4.99	□□□□□ -1.61
CAF16	P43569	SNO4	YMR322C	714 nt		4.99	□□□□□ -1.61
CAF16	P43569	SYC1	YOR179C	567 nt		4.99	□□□□□ -1.61
CAF16	P43569	HSP33	YOR391C	714 nt		4.99	□□□□□ -1.61
CAF16	P43569	HSP32	YPL280W	714 nt		4.99	□□□□□ -1.61
CAF16	P43569	NUF2	YOL069W	1356 nt		4.99	□□□□□ -1.61
CAF16	P43569	AMD1	YML035C	2433 nt		4.98	□□□□□ -1.61
CAF16	P43569	ADE13	YLR359W	1449 nt		4.98	□□□□□ -1.61
CAF16	P43569	FDC1	YDR539W	1512 nt		4.98	□□□□□ -1.61
CAF16	P43569	NOP16	YER002W	696 nt		4.98	□□□□□ -1.61
CAF16	P43569	YER186C	YER186C	921 nt		4.98	□□□□□ -1.61
CAF16	P43569	CDC8	YJR057W	651 nt		4.98	□□□□□ -1.61
CAF16	P43569	YLR125W	YLR125W	411 nt		4.98	□□□□□ -1.61
CAF16	P43569	YNL019C	YNL019C	855 nt		4.98	□□□□□ -1.61
CAF16	P43569	YNL033W	YNL033W	855 nt		4.98	□□□□□ -1.61
CAF16	P43569	HAP4	YKL109W	1665 nt		4.98	□□□□□ -1.61
CAF16	P43569	ATE1	YGL017W	1512 nt		4.97	□□□□□ -1.61
CAF16	P43569	MEF1	YLR069C	2286 nt		4.97	□□□□□ -1.61
CAF16	P43569	RRP45	YDR280W	918 nt		4.97	□□□□□ -1.61
CAF16	P43569	YIL060W	YIL060W	435 nt		4.97	□□□□□ -1.61
CAF16	P43569	TPT1	YOL102C	693 nt		4.97	□□□□□ -1.61
CAF16	P43569	TAF14	YPL129W	735 nt		4.97	□□□□□ -1.61
CAF16	P43569	SGF29	YCL010C	780 nt		4.97	□□□□□ -1.61
CAF16	P43569	NOP58	YOR310C	1536 nt		4.97	□□□□□ -1.61
CAF16	P43569	YHR182W	YHR182W	2358 nt		4.97	□□□□□ -1.61
CAF16	P43569	YRF1-4	YLR466W	4149 nt		4.96	□□□□□ -1.62
CAF16	P43569	YEL068C	YEL068C	333 nt		4.96	□□□□□ -1.62
CAF16	P43569	YER187W	YER187W	426 nt		4.96	□□□□□ -1.62
CAF16	P43569	ZRT1	YGL255W	1131 nt		4.96	□□□□□ -1.62
CAF16	P43569	YIR023C-A	YIR023C-A	324 nt		4.96	□□□□□ -1.62
CAF16	P43569	DAL2	YIR029W	1032 nt		4.96	□□□□□ -1.62
CAF16	P43569	CTK2	YJL006C	972 nt		4.96	□□□□□ -1.62
CAF16	P43569	YJR085C	YJR085C	318 nt		4.96	□□□□□ -1.62
CAF16	P43569	STM1	YLR150W	822 nt		4.96	□□□□□ -1.62
CAF16	P43569	TDA5	YLR426W	981 nt		4.96	□□□□□ -1.62
CAF16	P43569	YLR444C	YLR444C	303 nt		4.96	□□□□□ -1.62
CAF16	P43569	YML012C-A	YML012C-A	378 nt		4.96	□□□□□ -1.62
CAF16	P43569	SAM37	YMR060C	984 nt		4.96	□□□□□ -1.62
CAF16	P43569	VPS20	YMR077C	666 nt		4.96	□□□□□ -1.62
CAF16	P43569	YMR158C-A	YMR158C-A	138 nt		4.96	□□□□□ -1.62
CAF16	P43569	RNA1	YMR235C	1224 nt		4.96	□□□□□ -1.62
CAF16	P43569	GPI12	YMR281W	915 nt		4.96	□□□□□ -1.62
CAF16	P43569	CUZ1	YNL155W	825 nt		4.96	□□□□□ -1.62
CAF16	P43569	ILV6	YCL009C	930 nt		4.96	□□□□□ -1.62
CAF16	P43569	CLG1	YGL215W	1359 nt		4.95	□□□□□ -1.62
CAF16	P43569	RAD59	YDL059C	717 nt		4.95	□□□□□ -1.62
CAF16	P43569	YDR029W	YDR029W	315 nt		4.95	□□□□□ -1.62
CAF16	P43569	GRX4	YER174C	735 nt		4.95	□□□□□ -1.62
CAF16	P43569	YGL006W-A	YGL006W-A	111 nt		4.95	□□□□□ -1.62
CAF16	P43569	YHR173C	YHR173C	339 nt		4.95	□□□□□ -1.62
CAF16	P43569	AIM20	YIL158W	615 nt		4.95	□□□□□ -1.62
CAF16	P43569	CYC1	YJR048W	330 nt		4.95	□□□□□ -1.62
CAF16	P43569	SFH1	YLR321C	1281 nt		4.95	□□□□□ -1.62
CAF16	P43569	REH1	YLR387C	1299 nt		4.95	□□□□□ -1.62
CAF16	P43569	TEM1	YML064C	738 nt		4.95	□□□□□ -1.62
CAF16	P43569	YMR099C	YMR099C	894 nt		4.95	□□□□□ -1.62
CAF16	P43569	MCK1	YNL307C	1128 nt		4.95	□□□□□ -1.62
CAF16	P43569	snR11	snR11	258 nt		4.95	□□□□□ -1.62
CAF16	P43569	YOR152C	YOR152C	771 nt		4.95	□□□□□ -1.62
CAF16	P43569	YPR114W	YPR114W	948 nt		4.95	□□□□□ -1.62

Retrieved 100 of 7,029 protein–RNA pairs in 14.7 ms