Protein–RNA interactions for Protein: P18754

RCC1, Regulator of chromosome condensation, humanhuman

Predicted RBP Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1P18754 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC18.72■□□□□ 0.59
RCC1P18754 SNX5-217ENST00000606557 1087 ntBASIC18.72■□□□□ 0.59
RCC1P18754 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC18.72■□□□□ 0.59
RCC1P18754 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RCC1P18754 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.72■□□□□ 0.59
RCC1P18754 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RCC1P18754 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RCC1P18754 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC18.71■□□□□ 0.59
RCC1P18754 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RCC1P18754 AC137767.1-201ENST00000602918 1920 ntBASIC18.71■□□□□ 0.59
RCC1P18754 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RCC1P18754 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.71■□□□□ 0.59
RCC1P18754 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RCC1P18754 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC18.71■□□□□ 0.59
RCC1P18754 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RCC1P18754 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC18.71■□□□□ 0.59
RCC1P18754 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC18.71■□□□□ 0.59
RCC1P18754 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC18.71■□□□□ 0.59
RCC1P18754 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RCC1P18754 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC18.71■□□□□ 0.59
RCC1P18754 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RCC1P18754 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.58
RCC1P18754 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RCC1P18754 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC18.7■□□□□ 0.58
RCC1P18754 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC18.7■□□□□ 0.58
RCC1P18754 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RCC1P18754 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC18.7■□□□□ 0.58
RCC1P18754 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RCC1P18754 GUSBP5-202ENST00000510805 1989 ntBASIC18.7■□□□□ 0.58
RCC1P18754 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RCC1P18754 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RCC1P18754 TK2-202ENST00000417693 1046 ntTSL 2 BASIC18.7■□□□□ 0.58
RCC1P18754 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
RCC1P18754 AC137630.3-201ENST00000607245 391 ntBASIC18.7■□□□□ 0.58
RCC1P18754 AL031848.2-201ENST00000607670 837 ntBASIC18.7■□□□□ 0.58
RCC1P18754 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC18.7■□□□□ 0.58
RCC1P18754 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.7■□□□□ 0.58
RCC1P18754 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC18.7■□□□□ 0.58
RCC1P18754 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RCC1P18754 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RCC1P18754 REST-206ENST00000612429 1376 ntTSL 5 BASIC18.69■□□□□ 0.58
RCC1P18754 REST-207ENST00000616975 1370 ntTSL 5 BASIC18.69■□□□□ 0.58
RCC1P18754 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RCC1P18754 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RCC1P18754 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
RCC1P18754 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
RCC1P18754 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
RCC1P18754 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC18.69■□□□□ 0.58
RCC1P18754 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RCC1P18754 SENP5-202ENST00000419026 973 ntTSL 3 BASIC18.69■□□□□ 0.58
RCC1P18754 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RCC1P18754 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RCC1P18754 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RCC1P18754 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RCC1P18754 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
RCC1P18754 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RCC1P18754 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RCC1P18754 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RCC1P18754 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RCC1P18754 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RCC1P18754 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RCC1P18754 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC18.68■□□□□ 0.58
RCC1P18754 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC18.68■□□□□ 0.58
RCC1P18754 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RCC1P18754 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RCC1P18754 AL353803.4-201ENST00000565882 1934 ntBASIC18.68■□□□□ 0.58
RCC1P18754 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RCC1P18754 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
RCC1P18754 LSR-203ENST00000360798 1963 ntTSL 2 BASIC18.68■□□□□ 0.58
RCC1P18754 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
RCC1P18754 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC18.67■□□□□ 0.58
RCC1P18754 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC18.67■□□□□ 0.58
RCC1P18754 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
RCC1P18754 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RCC1P18754 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RCC1P18754 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RCC1P18754 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RCC1P18754 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RCC1P18754 AC127496.7-201ENST00000625110 1798 ntBASIC18.67■□□□□ 0.58
RCC1P18754 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
RCC1P18754 GCA-201ENST00000233612 1694 ntTSL 2 BASIC18.66■□□□□ 0.58
RCC1P18754 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RCC1P18754 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RCC1P18754 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RCC1P18754 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
RCC1P18754 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RCC1P18754 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC18.66■□□□□ 0.58
RCC1P18754 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
RCC1P18754 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC18.66■□□□□ 0.58
RCC1P18754 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC18.66■□□□□ 0.58
RCC1P18754 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RCC1P18754 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RCC1P18754 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
RCC1P18754 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC18.66■□□□□ 0.58
RCC1P18754 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RCC1P18754 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RCC1P18754 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
RCC1P18754 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC18.65■□□□□ 0.58
RCC1P18754 AL137060.1-201ENST00000618151 2648 ntBASIC18.65■□□□□ 0.58
RCC1P18754 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms