Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 AC079630.1-202ENST00000618127 1840 ntBASIC26.32■■□□□ 1.8
COL2A1P02458 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
COL2A1P02458 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
COL2A1P02458 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC26.32■■□□□ 1.8
COL2A1P02458 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC26.32■■□□□ 1.8
COL2A1P02458 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
COL2A1P02458 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC26.32■■□□□ 1.8
COL2A1P02458 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC26.32■■□□□ 1.8
COL2A1P02458 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
COL2A1P02458 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
COL2A1P02458 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
COL2A1P02458 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
COL2A1P02458 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
COL2A1P02458 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
COL2A1P02458 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC26.31■■□□□ 1.8
COL2A1P02458 CCDC92B-201ENST00000575506 885 ntBASIC26.31■■□□□ 1.8
COL2A1P02458 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC26.31■■□□□ 1.8
COL2A1P02458 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
COL2A1P02458 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC26.31■■□□□ 1.8
COL2A1P02458 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
COL2A1P02458 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
COL2A1P02458 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
COL2A1P02458 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
COL2A1P02458 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
COL2A1P02458 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
COL2A1P02458 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
COL2A1P02458 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC26.3■■□□□ 1.8
COL2A1P02458 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
COL2A1P02458 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC26.3■■□□□ 1.8
COL2A1P02458 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC26.3■■□□□ 1.8
COL2A1P02458 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
COL2A1P02458 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC26.3■■□□□ 1.8
COL2A1P02458 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
COL2A1P02458 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
COL2A1P02458 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC26.3■■□□□ 1.8
COL2A1P02458 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC26.29■■□□□ 1.8
COL2A1P02458 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
COL2A1P02458 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
COL2A1P02458 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
COL2A1P02458 AL139125.2-201ENST00000623134 1869 ntBASIC26.29■■□□□ 1.8
COL2A1P02458 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
COL2A1P02458 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
COL2A1P02458 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC26.29■■□□□ 1.8
COL2A1P02458 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC26.29■■□□□ 1.8
COL2A1P02458 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
COL2A1P02458 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC26.29■■□□□ 1.8
COL2A1P02458 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
COL2A1P02458 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
COL2A1P02458 LINC01124-201ENST00000409786 2117 ntBASIC26.28■■□□□ 1.8
COL2A1P02458 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
COL2A1P02458 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
COL2A1P02458 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
COL2A1P02458 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
COL2A1P02458 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC26.28■■□□□ 1.8
COL2A1P02458 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
COL2A1P02458 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC26.28■■□□□ 1.8
COL2A1P02458 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC26.27■■□□□ 1.8
COL2A1P02458 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
COL2A1P02458 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
COL2A1P02458 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC26.27■■□□□ 1.8
COL2A1P02458 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC26.27■■□□□ 1.8
COL2A1P02458 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
COL2A1P02458 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
COL2A1P02458 MPST-204ENST00000404393 1329 ntTSL 5 BASIC26.27■■□□□ 1.8
COL2A1P02458 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
COL2A1P02458 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
COL2A1P02458 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
COL2A1P02458 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC26.26■■□□□ 1.79
COL2A1P02458 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
COL2A1P02458 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
COL2A1P02458 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC26.26■■□□□ 1.79
COL2A1P02458 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC26.26■■□□□ 1.79
COL2A1P02458 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
COL2A1P02458 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
COL2A1P02458 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
COL2A1P02458 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
COL2A1P02458 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
COL2A1P02458 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC26.25■■□□□ 1.79
COL2A1P02458 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
COL2A1P02458 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
COL2A1P02458 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
COL2A1P02458 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
COL2A1P02458 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC26.25■■□□□ 1.79
COL2A1P02458 KRT18P14-201ENST00000534205 1250 ntBASIC26.25■■□□□ 1.79
COL2A1P02458 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
COL2A1P02458 AC092437.1-201ENST00000624794 1048 ntBASIC26.25■■□□□ 1.79
COL2A1P02458 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
COL2A1P02458 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
COL2A1P02458 AC004812.2-201ENST00000611079 2094 ntBASIC26.25■■□□□ 1.79
COL2A1P02458 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC26.25■■□□□ 1.79
COL2A1P02458 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
COL2A1P02458 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
COL2A1P02458 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
COL2A1P02458 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
COL2A1P02458 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
COL2A1P02458 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC26.24■■□□□ 1.79
COL2A1P02458 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC26.24■■□□□ 1.79
COL2A1P02458 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
COL2A1P02458 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
COL2A1P02458 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC26.24■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms